TGCGTGCGCTATACGACTCACTATCTCGAGAGCATCCGCGGAATTCTCAT
GGGTCCCGAGATCTGAGCTGAGACTTGAAGGAGCCAGGTATGGATTGATC
TGACAAAAGTTCAGTCAAGGAAGCAGCAATCACAAAATCCCTCAGGCAGA
AATGAACAGCTAGTGCCCAAGGAAGTGAGACTGGTGGCTGGGCAGAGAGC
TCACACGGGGGACGGCTGGAGTGGAGGTGAAACGGCAGATGGGAGCTTCA
TTACAGCAAGGTTGTTCTACAACCAGTGACAGACTGTCAGAACATGGAAG
CTGTGATCCGAGTATTGACTAAAAGATTCTCCTGGCTGCTGCCTGGAGAC
CAGCAGAAGGACTCGAATGGAAGCAGAAGGGGGTTTTAAAGCCTACTGCT
GTAGATAAGATTGTACTTGGGTGGGGGCATTGGTGGTGCAGAGAAGGGGC
AAATCCGATGCAGAAAAGTCAACAGGAGCAATAGCTCCCATGGGTGTGTG
GGATGGTGGGAAGATGCTCTAACCGTATAAAGCTGGCGCACCGTATCTTG
ACACTGTCCCAGCAACACTGTCAAGGAAATACGCAATAACCGATGCGGCT
CCTTTTTTCCCCACCCAACGTTTATTGCTCCACAAATAACAAACTCTATG
TCCTTTCCCGCCATTGCGCTTACGGTCCCCCTCTTTTTTTTCGCCCCCTT
CCTTTTCCCCTTTTCTCTACCTTTCCCCTTCTCCTT

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTTACGNGACTTCTGTGGACTGTATCTTGTGTATTCTGTATGGT
TTTTTGTTTGTTTGTTTCCTTTTGTTTTTTGGCTAATATCTATTTATTAG
TGAGTACTGACCATGAATTTCCTTTTGCATCTAAATTATCTCACTCAGGA
TGATATTTTCTAGTTCCATCCATTTGCCTGCTAAAGTCAGGATGTCCTTT
TTTTTAATAGCTGTGTAGTATTCCATTGAGTAAATGAACCACATTTTCTG
TATCCATTCTTCTGTTGNGTACTTCTAAGNNGNNNCCAGCTNCCGACAAN
CACTTTTCCTCCTCCTATGAATGTAGGGGAACATATGCACCTGTGGTATG
GTGGGCCCCCCCCCGCTTATATTCTCAAGAGTGGTATAGCTGGCTCTTCA
GGCACATCTATCTTTAATTTCTCCGAGCAACCTTTGATTTCCAGAGCGGT
TGTACCAAGTTGCAATTCCACCAGCCATTGTAATCTCCGTTCCCTTTCTA
TACCTCCCTGGCTGCACCTGCCTTTCCTTTGACCCCTTACCTTCCCCATC
TTTGTTTTTAGCTTTCCCGACCCTCCCAGTCCCACTTTGTTCTACCATTC
CACCCATCCACTTCTTTTTTTTTTCTCCCGCCCTGCCCCCTTTTTGCTCT
TTATACACTTCACGCCTCTATTCTTCTCCCCCACCCGCTATTTCTATTTC
ACT

Query= MSMg01no381_i12.b1 MSMg01no381_i12.b1 CHROMAT_FILE:
MSMg01no381_i12.b1 PHD_FILE: MSMg01no381_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:58 2005
         (442 letters)



>mm_chr9_85911689_85912531
          Length = 843

 Score =  803 bits (415), Expect = 0.0
 Identities = 436/443 (98%), Gaps = 1/443 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgagctgagacttgaaggagccaggtatggattgatctgacaaaagttcagtcaagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgagctgagacttgaaggagccaggtatggattgatctgacaaaagttcagtcaagga 260

                                                                       
Query: 61  agcagcaatcacaaaatccctcaggcagaaatgaacagctagtgcccaaggaagtgagac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcagcaatcacaaaatccctcaggcagaaatgaacagctagtgcccaaggaagtgagac 320

                                                                       
Query: 121 tggtggctgggcagagagctcacacgggggacggctggagtggaggtgaaacggcagatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggtggctgggcagagagctcacacgggggacggctggagtggaggtgaaacggcagatg 380

                                                                       
Query: 181 gg-agcttcattacagcaaggttgttctacaaccagtgacagactgtcagaacatggaag 239
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggagcttcattacagcaaggttgttctacaaccagtgacagactgtcagaacatggaag 440

                                                                       
Query: 240 ctgtgatccgagtattgactaaaagattctcctggctgctgcctggagaccagcagaagg 299
           |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 ctgtgatccgagtaatgactaaaagattcttctggctgctgcctggagaccagcagaagg 500

                                                                       
Query: 300 actcgaatggaagcagaagggggttttaaagcctactgctgtagataagattgtacttgg 359
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| 
Sbjct: 501 actcgaatggaagcagaaggggtttttaaagcctactgctgtagataagattgtacttgc 560

                                                                       
Query: 360 gtgggggcattggtggtgcagagaaggggcaaatccgatgcagaaaagtcaacaggagca 419
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 gtgggggcattggtggtgcagagaaggggcaaatccgatgtagaaaagtcaacaggagca 620

                                  
Query: 420 atagctcccatgggtgtgtggga 442
           |||||||||||| ||||||||||
Sbjct: 621 atagctcccatgagtgtgtggga 643


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 843
Length adjustment: 9
Effective length of query: 433
Effective length of database: 834
Effective search space:   361122
Effective search space used:   361122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)