Query= MSMg01no381_k02.b1 MSMg01no381_k02.b1 CHROMAT_FILE:
MSMg01no381_k02.b1 PHD_FILE: MSMg01no381_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:06 2005
(171 letters)
>mm_chr9_120864428_120864998
Length = 571
Score = 308 bits (159), Expect = 2e-88
Identities = 168/171 (98%)
Strand = Plus / Plus
Query: 1 acagggaagacatcactgagcctgccatctgtgctcttcgtcatctgaccagccggcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagggaagacatcactgagcctgccatctgtgctcttcgtcatctgaccagccggcatc 260
Query: 61 aggaagccgagatggcccagaatgccgttcgccttcattatggactgcctgctgtggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 261 aggaagccgagatggcccagaatgccgttcgccttcattatggactgcctgttgtggtta 320
Query: 121 aactcctgcacccaccatcccactggtctctgataaaggtgaactgttagc 171
|||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 aactcctgcacccaccatcccactggcctctgataaaggtgaactgttagc 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space: 91769
Effective search space used: 91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no381_k02.g1 MSMg01no381_k02.g1 CHROMAT_FILE:
MSMg01no381_k02.g1 PHD_FILE: MSMg01no381_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:06 2005
(429 letters)
>mm_chr9_121050794_121051624
Length = 831
Score = 741 bits (383), Expect = 0.0
Identities = 417/429 (97%), Gaps = 2/429 (0%)
Strand = Plus / Minus
Query: 1 tttcttcatccggcgtctgtccccttgtgactgaccacgtgtccactgccactgtgctct 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 629 tttcttcatccggcgtctgtccccttgtgattgaccacgtgtccactgccactgtgctct 570
Query: 61 gttttagccatgaatgtcactgtgggcacagctgtgggtgcaacactgggcctcatgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gttttagccatgaatgtcactgtgggcacagctgtgggtgcaacactgggcctcatgtcc 510
Query: 121 accacaggacccaaatgtggagtggcttggagacactagcatggacaacccgtgcccagg 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 509 accacaggacccaaatgtggagtggcttggagacactagcatggtcaacccgtgcccagg 450
Query: 181 tctcttgctggttgcacagctcagcgctgactggctttcccttgtgctttgtgcagtggg 240
||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 449 tctcttgctggctgcacagctcagcgctggctggctttcccttgtgctttatgcagtggg 390
Query: 241 cgttggcttcatcaagag--taatccgtgcgagtgctatgctcatagccagatgttggca 298
||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 389 cgttggcttcaccaagagagtaatctgtgcgagtgctatgctcatagccagatgttggca 330
Query: 299 tgtaccaatctgtcactccctaacatcgggccgtctgaggaggcagactgaggcgtgacg 358
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 329 tgtaccaatctgtcactccctaacatcgggccgtctgaggagggagactgaggcgtgacg 270
Query: 359 gatggtttcgtttctcaggtatgagcacatcctcatggagcctgaccccgttcctgccta 418
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggtggtttcgtttctcaggtatgagcacatcctcatggagcctgaccccgttcctgccta 210
Query: 419 cgcgctgaa 427
||||||||
Sbjct: 209 tgcgctgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 831
Length adjustment: 9
Effective length of query: 420
Effective length of database: 822
Effective search space: 345240
Effective search space used: 345240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
