Query= MSMg01no382_h10.b1 MSMg01no382_h10.b1 CHROMAT_FILE:
MSMg01no382_h10.b1 PHD_FILE: MSMg01no382_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:13 2005
(596 letters)
>mm_chr9_86444381_86445376
Length = 996
Score = 1013 bits (524), Expect = 0.0
Identities = 581/614 (94%), Gaps = 22/614 (3%)
Strand = Plus / Minus
Query: 5 gaattcattatttgtacctgagtggtggtagcatatgcctttaatcccagccctcgggga 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gaattcattatttgaagctgagtggtggtagcatatgcctttaatcccagccctcgggga 670
Query: 65 gggggcagaagcaggggatctctatgaattcaaggccagcctgctctacaaatagagttc 124
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 669 gggggcagaagcaggggatctctatgagttcaaggccagcctgctctacaaatagagttc 610
Query: 125 caggacagccagggctacacagagaaacgttggctgaaaaaaaacaaaccaaccaaacaa 184
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 609 caggacagccagggctacacagagaaacgttggctgaaaaaaaaccaaccaaccaaacaa 550
Query: 185 acaaaaacaacaacaacaaaaaccccaaaacaaaaccgactgtcccagcgttatatgata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 acaaaaacaacaacaacaaaaaccccaaaacaaaaccgactgtcccagcgttatatgata 490
Query: 245 ataggacaacttgtaatgcactcaccaccattttactcattagcaaaaccagttttaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ataggacaacttgtaatgcactcaccaccattttactcattagcaaaaccagttttaaaa 430
Query: 305 aagtttcctctttccctaatagacagaatatattgtgttgctgcagtgact--------- 355
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aagtttcctctttccctaatagacagaatatattgtgttgctgcagtgactacctcaagc 370
Query: 356 -------------gcctcagtctcttgctgactggtagtcaggaaactcagaaggaaact 402
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 369 ttgcagtccgcctgcctcagtctcttgctgactggtagtcaggctactcagaaggaaact 310
Query: 403 gctgtctgcactacaacaaagttgattattccgtcatgtaaaagtatactagaaggaaga 462
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 309 gctgtctgcactacaacaaagttgattattccggcatgtaaaaatatactagaaggaaga 250
Query: 463 ctttcctttacaggagccgccagggctgctaggctcttgtactgtatgtatccttccaga 522
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctttcctttacaggaaccgtcagggctgctaggctcttgtactgtatgtatccttccaga 190
Query: 523 gagtctatgcatagaaaagcacatatttttggactcaaccctctgactttcagaaacaaa 582
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 189 gagtctatgcatagaaaagcacatatttttggactcaaccctctgattttcagaaacaaa 130
Query: 583 ctgctaccaaagtc 596
||||||||||||||
Sbjct: 129 ctgctaccaaagtc 116
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_h10.g1 MSMg01no382_h10.g1 CHROMAT_FILE:
MSMg01no382_h10.g1 PHD_FILE: MSMg01no382_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:13 2005
(552 letters)
>mm_chr9_86316182_86317133
Length = 952
Score = 1036 bits (536), Expect = 0.0
Identities = 548/552 (99%)
Strand = Plus / Plus
Query: 1 ctggtgcccacatggtgatcgcagctgaaatgcaacgtggaacagaaaaccaaaagcgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 ctggtgcccacatggtgatcgcagctgaaatgcaacgtggaacagaaaaccaaaagcaca 260
Query: 61 acttactctttattcctgcttttgatacagggctggtagaggactttgatggcattccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttactctttattcctgcttttgatacagggctggtagaggactttgatggcattccag 320
Query: 121 gcagagccagagccagcttccaaggaactttccaacagcgggaacttcctgctacaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 gcagagccagagccagcttccaaggaactttccaacagcgggaacttcctgctacaactg 380
Query: 181 gaacttctcagaggttcgatcaccaaactgtctgagttcaaaacccagagctaaaggatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaacttctcagaggttcgatcaccaaactgtctgagttcaaaacccagagctaaaggatg 440
Query: 241 ggaagagaagttcacagaggagaatattgctattccatctatattgtgtatcatcacctc 300
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 441 ggaagagaagttcacagaggagaatattgctattccatctatattgtataccatcacctc 500
Query: 301 aaaaacaaacaaataaacaaacaaacaaaaaacacaggaagcaacaggaaaacataggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaaacaaacaaataaacaaacaaacaaaaaacacaggaagcaacaggaaaacataggta 560
Query: 361 gataatgtataagcaaggtacacttttaaattttactcttattttactttatgtagtatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gataatgtataagcaaggtacacttttaaattttactcttattttactttatgtagtatt 620
Query: 421 tgggagagtaacgatataattttttttaaatgattaggaaaaaggcatctatataaatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgggagagtaacgatataattttttttaaatgattaggaaaaaggcatctatataaatgg 680
Query: 481 caatgctataattaatctgaaatatttggagctcccagacatcagtgaggggtcaaacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caatgctataattaatctgaaatatttggagctcccagacatcagtgaggggtcaaacaa 740
Query: 541 tgtaagcaaaga 552
||||||||||||
Sbjct: 741 tgtaagcaaaga 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
