Query= MSMg01no383_c08.b1 MSMg01no383_c08.b1 CHROMAT_FILE:
MSMg01no383_c08.b1 PHD_FILE: MSMg01no383_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:07 2005
(550 letters)
>mm_chr9_118625442_118626391
Length = 950
Score = 1038 bits (537), Expect = 0.0
Identities = 543/545 (99%)
Strand = Plus / Plus
Query: 5 gaattcatttgtacctgctatttataattcgtttgttcctttgttcttgcctcccgatga 64
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattcatctgtacctgctatttataattcgtttcttcctttgttcttgcctcccgatga 264
Query: 65 gaaaataaaggagaagggtttcatataaactgattttgttctttgtcaccagtggttggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaaataaaggagaagggtttcatataaactgattttgttctttgtcaccagtggttggg 324
Query: 125 aagatgctcatgacaggaacatgctatgccacttccctttctccctgcttaccagtcccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagatgctcatgacaggaacatgctatgccacttccctttctccctgcttaccagtcccc 384
Query: 185 tagccttgatgggatataatcctgtcgctcagaacagctagttctgagtcttctgatgtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagccttgatgggatataatcctgtcgctcagaacagctagttctgagtcttctgatgtt 444
Query: 245 ttggcagctacatgttggtatggatgaaacagtgatctttgttcgtgaggcctccacttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttggcagctacatgttggtatggatgaaacagtgatctttgttcgtgaggcctccacttt 504
Query: 305 ccccgggctcgataccctctttaactgtcaacttgacattgcctagagtcatcagaaagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccccgggctcgataccctctttaactgtcaacttgacattgcctagagtcatcagaaagg 564
Query: 365 agatcctccattaaggaattgtctagaatagatgggcttgtcagcgtgtctgcaggtgat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agatcctccattaaggaattgtctagaatagatgggcttgtcagcgtgtctgcaggtgat 624
Query: 425 tgtcttgattgttaattgatgggcccggcccactgtgggcagaaccattccctaggctgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgtcttgattgttaattgatgggcccggcccactgtgggcagaaccattccctaggctgt 684
Query: 485 tctaagaaaactagctaagtatgaggctgcttattctggagccagcaagaagttttcccc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tctaagaaaactagctaagtatgaggctgcttattctggagccagcaagaagttttcccc 744
Query: 545 cacgg 549
|||||
Sbjct: 745 cacgg 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_c08.g1 MSMg01no383_c08.g1 CHROMAT_FILE:
MSMg01no383_c08.g1 PHD_FILE: MSMg01no383_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:07 2005
(464 letters)
>mm_chr9_118837438_118838300
Length = 863
Score = 853 bits (441), Expect = 0.0
Identities = 456/461 (98%), Gaps = 1/461 (0%)
Strand = Plus / Minus
Query: 1 ccctactctgttaacaagtaaccaatctgacactgaaaacaaacaaagcaggctgttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ccctactctgttaacaagtaaccaatctgacactgaaaacaaacaaagcaggctgttaaa 601
Query: 61 gatatgaaaagcccgtcccaaaaggcaatgtcagcaagctgtgcagagcaagcgcctcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gatatgaaaagcccgtcccaaaaggcaatgtcagcaagctgtgcagagcaagcgcctcca 541
Query: 121 gtcacaagcacagggtttggctctcccacagacctattctgactcaggaatcggatcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gtcacaagcacagggtttggctctcccacagacctattctgactcaggaatcggatcagt 481
Query: 181 caggggacccggggagctcgcaaaatggcccactcccgaggtgaggtgggggcagcaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 caggggacccggggagctcgcaaaatggcccactcccgaggtgaggtgggggcagcaaga 421
Query: 241 ggaaccaggtcctgacgagtatccactagcttcttgtcacacctcttcccaagaaccagg 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 420 ggaaccaggtcctgacgagtatccactagcttcttgtcacacctctt-ccaagaaccagg 362
Query: 301 gttttgatcacataaagcccacagcgcagaggaatgctgggttctccacgctttcttgaa 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 361 gttttgatcacataaagcccacagtgcagaggaatgctgggttctccacgctttcttgaa 302
Query: 361 gtttgcttccaagaccctgcgagggcacatgtccagtgagggcctcagtagctcaggccc 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtttgcttccaagaccctgtgagggcacatgtccagtgagggcctcagtagctcaggccc 242
Query: 421 tcctggtgggaaggctagaccagagaggtgctcctcactta 461
|| |||||||||||| |||||||||||||||||||||||||
Sbjct: 241 tcatggtgggaaggccagaccagagaggtgctcctcactta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 863
Length adjustment: 10
Effective length of query: 454
Effective length of database: 853
Effective search space: 387262
Effective search space used: 387262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
