Query= MSMg01no383_g01.b1 MSMg01no383_g01.b1 CHROMAT_FILE:
MSMg01no383_g01.b1 PHD_FILE: MSMg01no383_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:25 2005
(515 letters)
>mm_chr9_100123917_100124832
Length = 916
Score = 932 bits (482), Expect = 0.0
Identities = 506/514 (98%), Gaps = 3/514 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttaagactttgaaatggtattgatagacatcggcagtagtcaatagcattca 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttaagacagtgaaatggtattgatagacatcggcagtagtcaatagcattca 263
Query: 64 caggatactgcaataacaaagaataacaaaaggcatcttcatagtagcaataaaaacatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caggatactgcaataacaaagaataacaaaaggcatcttcatagtagcaataaaaacatt 323
Query: 124 aaaatcttgcaataaaaataaaatggaagcatgtaagatctatatacagaaaccctacaa 183
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaaatcttgcagtaaaaataaaatggaagcatgtaagatctatatacagaaaccctacaa 383
Query: 184 acgccataatgtaagaaaaaaaaaacttgaacaaataaagacaaatatactcttggatta 243
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 384 acgccataatgtaagaaaaaaaaa-cttgaacaaataaagacaaatatactcttggatta 442
Query: 244 gaatttttggcatcatggagatattctcgt-aattgcatttacagttataaagacatcta 302
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 443 gaatttttggcatcatggagatattctcgttaattgcatttacagttataaagacatcca 502
Query: 303 ataaaaaagacagctttttaaaatgaggctagttgatcctacaatttataccca-aaaaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 503 ataaaaaagacagctttttaaaatgaggctagttgatcctacaatttatacccccaaaaa 562
Query: 362 taagaaaatattgacaggaaaattctaaataaaaatatcattggcaggtgggctgccctt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 taagaaaatattgacaggaaaattctaaataaaaatatcattggcaggtgggctgccctt 622
Query: 422 aagaaatgccaaaatatgtaataactcaataattaaaagtgtgtagtgttgttatatcaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aagaaatgccaaaatatgtaataactcaataattaaaagtgtgtagtgttgttatatcaa 682
Query: 482 acaacagaacataatggtgacttcaataagacac 515
||||||||||||||||||||||||||||||||||
Sbjct: 683 acaacagaacataatggtgacttcaataagacac 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 916
Length adjustment: 10
Effective length of query: 505
Effective length of database: 906
Effective search space: 457530
Effective search space used: 457530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_g01.g1 MSMg01no383_g01.g1 CHROMAT_FILE:
MSMg01no383_g01.g1 PHD_FILE: MSMg01no383_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:25 2005
(504 letters)
>mm_chr9_100297915_100298819
Length = 905
Score = 727 bits (376), Expect = 0.0
Identities = 427/446 (95%), Gaps = 6/446 (1%)
Strand = Plus / Minus
Query: 65 agctattttcagtcacaccagcagagggcatcggatcccattacggatggttgtgaacca 124
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 855 agctatcttcagtcacaccagcagagggcatcggatcccattacacatggttgtgaacca 796
Query: 125 ccatgtggttgctgggaattgaactctggacctctggaagagcaggcagtgctcttaaca 184
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 795 ccatgtggttgctgggaattgaactctggacttctggaagagcaggcagtgctcttaaca 736
Query: 185 gctgagccatctctccagc----cccccc-cttccttgtgatttacattacacatattgg 239
||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||
Sbjct: 735 gctgagccatctctccatccccaccccccacttccttgtgatttacattacacatattgg 676
Query: 240 tttaaaaaagtgacatggttattattttgagaagtggaggtcattaa-aaaaactttacc 298
||| |||||||||||||||| |||||||||| ||||||||||||||| |||||||||||
Sbjct: 675 ttttaaaaagtgacatggttgttattttgaggagtggaggtcattaaggaaaactttacc 616
Query: 299 taaactctgcacggcaagactgttggcataaactgctttggcctccgaggttgtggttta 358
||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||
Sbjct: 615 taaactctgcacggcaagaatgtttgcataaactgctttggccaccgaggttgtggttta 556
Query: 359 agttgtcaccttgtgctggatttccacctaactgccttacggtgcgctcatatgagtgat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agttgtcaccttgtgctggatttccacctaactgccttacggtgcgctcatatgagtgat 496
Query: 419 gcactaataaggactctacttcttgctgggcatttagatggcatactgctcttcagtacc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 495 gcactaataaggactctacttcttgctgggcatttagatggcatactgctcttcactacc 436
Query: 479 actgtgagggctgctgtaagggcacc 504
||||||||||||||||||||||||||
Sbjct: 435 actgtgagggctgctgtaagggcacc 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 905
Length adjustment: 10
Effective length of query: 494
Effective length of database: 895
Effective search space: 442130
Effective search space used: 442130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
