Query= MSMg01no383_h02.b1 MSMg01no383_h02.b1 CHROMAT_FILE:
MSMg01no383_h02.b1 PHD_FILE: MSMg01no383_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:30 2005
(528 letters)
>mm_chr9_95728545_95729473
Length = 929
Score = 977 bits (505), Expect = 0.0
Identities = 520/525 (99%), Gaps = 1/525 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgaatgtcc-tggggctttagctcacaatggtcctcacaagaaattccatcca 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgaatgtccctggggctttagctcacaatggtcctcacaagaaattccatcca 264
Query: 64 tccattcatccttgtatctacggctgtctgaatcaagcccttcatctctaccttggcctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccattcatccttgtatctacggctgtctgaatcaagcccttcatctctaccttggcctc 324
Query: 124 cagtaggcctctttgaactccgtgttctttaatctgtgtgtgcatgcctcaagtggagtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagtaggcctctttgaactccgtgttctttaatctgtgtgtgcatgcctcaagtggagtg 384
Query: 184 tatgacctgagtcattttagtgcttcagattggaatcaaagaacctgtttgccaacggcc 243
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatgacctgagtcattttagtgtttcagattggaatcaaagaacctgtttgccaacggcc 444
Query: 244 agctatcaggaagaatcgggactacgtcgtaaattatagccaataaaaataggttgtgaa 303
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 445 agctatcaggaagaatcgggactacatcataaattatagccaataaaaataggttgtgaa 504
Query: 304 tttattattattcaataaattctgacattgtagaaagatgcaaaaagtgtctgtgtttct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttattattattcaataaattctgacattgtagaaagatgcaaaaagtgtctgtgtttct 564
Query: 364 aatgtagcatgctcaagacaatagcctacaagaggaaactccaaacagattgaacaaata 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatgtagcatgctcaagacaatagcctacaagaggaaactccaaacagattgaacaaata 624
Query: 424 gacctttttaatgtggtgcagccatacaatggaatattatagccataaatgttaatatat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gacctttttaatgtggtgcagccatacaatggaatattatagccataaatgttaatatat 684
Query: 484 actacatacaacatggatgaatcttgaaaacattatgctatgagc 528
|||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 actatatacaacatggatgaatcttgaaaacattatgctatgagc 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 929
Length adjustment: 10
Effective length of query: 518
Effective length of database: 919
Effective search space: 476042
Effective search space used: 476042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_h02.g1 MSMg01no383_h02.g1 CHROMAT_FILE:
MSMg01no383_h02.g1 PHD_FILE: MSMg01no383_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:30 2005
(499 letters)
>mm_chr9_95907561_95908460
Length = 900
Score = 928 bits (480), Expect = 0.0
Identities = 495/500 (99%), Gaps = 1/500 (0%)
Strand = Plus / Minus
Query: 1 ccttgacaaggctgccttctgactttcacacccacatggtgggacacacctttccctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ccttgacaaggctgccttctgactttcacacccacatggtgggacacacctttccctcag 513
Query: 61 tatgta-tatgtgcagtctctgtgtatgcacacaatatactaatgcaaatttaaatagta 119
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tatgtattatgtgcagtctctgtgtatgcacacaatatactaatgcaaatttaaatagta 453
Query: 120 aaaagatatagagtatgactttatttggaaatggggttctaatacagccaattattagaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aaaagatatagagtatgactttatttggaaatggggttctaatacagccaattattagaa 393
Query: 180 ggctctaacacagtatgactggtaggtaccgctgtaaaggagcaatgtagacaggctgac 239
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 392 ggctctaacacagtatgactggtaggtaccactgtaaaggagcaatgtagataggctgac 333
Query: 240 ccaggtgaaagcttatatgaagacaggtggggaaagagattgtcacctgaagataagagg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ccaggtgaaagcttatatgaagacaggtggggaaagagattgtcacctgaagataagagg 273
Query: 300 gctggaatgatcaatctacaagccaaggaatacataaagttataggaccataagagagag 359
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 272 gctggaatgatcaatctacaagccaaggaatacatgaagttataggaccgtaagagagag 213
Query: 360 ctgggggactataatcttgttgacaccttggttctgcttactagaatggtgagacagtta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ctgggggactataatcttgttgacaccttggttctgcttactagaatggtgagacagtta 153
Query: 420 agtggccttggtgagagcagctagctgaaggtactttatcatgagagccctgtgacacca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 agtggccttggtgagagcagctagctgaaggtactttatcatgagagccctgtgacacca 93
Query: 480 atacagggacctcaatgaca 499
||||||||||||||||||||
Sbjct: 92 atacagggacctcaatgaca 73
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 900
Length adjustment: 10
Effective length of query: 489
Effective length of database: 890
Effective search space: 435210
Effective search space used: 435210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
