Query= MSMg01no383_i20.b1 MSMg01no383_i20.b1 CHROMAT_FILE:
MSMg01no383_i20.b1 PHD_FILE: MSMg01no383_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:37 2005
(456 letters)
>mm_chr9_29734127_29734983
Length = 857
Score = 839 bits (434), Expect = 0.0
Identities = 448/453 (98%), Gaps = 1/453 (0%)
Strand = Plus / Plus
Query: 5 gaattc-catggtgtgagggagggttgttctttcattcattcataagtcctgacagtatg 63
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatggtgggagggagggttgttctttcattcattcataagtcctgacagtatg 264
Query: 64 aagcaccaatcctatccgtatttacaggcatcaccgtgttctatagtagtaggatgatgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagcaccaatcctatccgtatttacaggcatcaccgtgttctatagtagtaggatgatgg 324
Query: 124 aaacaattctctaccctcttggactgagtcggaagcattaaacaatacagctagacaaat 183
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 325 aaacaattctctaccctcttggactgagtcagaagcagtaaacaatacagctagacaaat 384
Query: 184 acactatacaatacactttcagaaagtaataagaaggaccagtgaaagacacgatagaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acactatacaatacactttcagaaagtaataagaaggaccagtgaaagacacgatagaga 444
Query: 244 actttttcctctagcaattcctcttcacttgaaaaatttttacaagattccaccatacag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actttttcctctagcaattcctcttcacttgaaaaatttttacaagattccaccatacag 504
Query: 304 gcactcacaaggggactacaaatcaaacatttactgctaataaacaatgaagaaatttat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcactcacaaggggactacaaatcaaacatttactgctaataaacaatgaagaaatttat 564
Query: 364 tttaaaacaattccttggtacacatataattttaccatttaatgaagatgaaagccgatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttaaaacaattccttggtacacatataattttaccatttaatgaagatgaaagccgatt 624
Query: 424 tgcatagnaatgagatggatttgcttgtttatt 456
||||||| |||||||||||||||||||||||||
Sbjct: 625 tgcatagtaatgagatggatttgcttgtttatt 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 857
Length adjustment: 10
Effective length of query: 446
Effective length of database: 847
Effective search space: 377762
Effective search space used: 377762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_i20.g1 MSMg01no383_i20.g1 CHROMAT_FILE:
MSMg01no383_i20.g1 PHD_FILE: MSMg01no383_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:37 2005
(466 letters)
>mm_chr9_29914147_29915012
Length = 866
Score = 893 bits (462), Expect = 0.0
Identities = 465/466 (99%)
Strand = Plus / Minus
Query: 1 agtgggttgataaaatcatcatttgcatgctctcccatcatcctgaagaccagaaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 agtgggttgataaaatcatcatttgcatgctctcccatcatcctgaagaccagaaagaaa 607
Query: 61 ggcacagggaacttcaagctatgcaggaggatgaagacatccctagtgcagccatagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ggcacagggaacttcaagctatgcaggaggatgaagacatccctagtgcagccatagtgt 547
Query: 121 cctcacctgctgggcataagaatgactctgcagaatcagagggcatggcagtcgagcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cctcacctgctgggcataagaatgactctgcagaatcagagggcatggcagtcgagcagt 487
Query: 181 ggagagccagggagaggggctacagagctcctgccaaggggaaaggcctcactcccagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ggagagccagggagaggggctacagagctcctgccaaggggaaaggcctcactcccagcc 427
Query: 241 ttttgttgaggtttgcctctgtaacagtgacaaaagctttcaaggaataattatagaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttttgttgaggtttgcctctgtaacagtgacaaaagctttcaaggaataattatagaacc 367
Query: 301 ctggggacttcagagagctaaagccactctgtgttctccctctggggtgtctctgtacca 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 366 ctggggacttcagagagctaaagccactctgtgttctccctctggagtgtctctgtacca 307
Query: 361 cataccatgatggaattttatacacactggtgagattatagccccattctacagagagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cataccatgatggaattttatacacactggtgagattatagccccattctacagagagct 247
Query: 421 gggaaatgtgaagtcaattgttttttctcccatggggagtccttta 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gggaaatgtgaagtcaattgttttttctcccatggggagtccttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
