Query= MSMg01no384_e06.b1 MSMg01no384_e06.b1 CHROMAT_FILE:
MSMg01no384_e06.b1 PHD_FILE: MSMg01no384_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:31 2005
(505 letters)
>mm_chr9_29023492_29024398
Length = 907
Score = 942 bits (487), Expect = 0.0
Identities = 499/503 (99%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 5 gaattc-acaacttggagacatattatatagaagtgtatggctaaccttttagcgggaaa 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gaattcaacaacttggagacatattatatagaagtgtatggctaaccttttagcgggaaa 648
Query: 64 ataaatgacaaaagaatgagaaagacattttctttaagtaaaagaaccatttacttagtt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 ataaatgacaaaagaatgagaaagacattttctttaagtaaaagaaccatttacttagtt 588
Query: 124 aactttggaatttcttagagtacctta-gcatttctctgaactgatagaaaatgaggctt 182
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 587 aactttggaatttcttagagtaccttatgcatttctctgaactgatagaaaatgaggctt 528
Query: 183 cggtcttgaaatggggcagggctggtagagtgcacagctctccattgagggaacagttga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 cggtcttgaaatggggcagggctggtagagtgcacagctctccattgagggaacagttga 468
Query: 243 tgctggagactaacaagcagcaccaagccaaaccgtgattgtgatccacatttccctaag 302
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 467 tgctggagactaacaagcagcaccaagacaaaccgtgattgtgatccacatttccctaag 408
Query: 303 aatcaatgctttctcatcatatgttcctaggttctcagtggctgagatttggacctgatc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aatcaatgctttctcatcatatgttcctaggttctcagtggctgagatttggacctgatc 348
Query: 363 acctgtgctgacatgagaagcaatgtctgaagtctttctttatcatagcacattacatag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 acctgtgctgacatgagaagcaatgtctgaagtctttctttatcatagcacattacatag 288
Query: 423 gaaggcactgcatggttcagggaagcagttgcaagtcaccctctagatgaaataacaggc 482
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 287 gaaggcactgcatggttcagggaagcagttgtaagtcaccctctagatgaaataacaggc 228
Query: 483 accctgctttcttattttcaaga 505
|||||||||||||||||||||||
Sbjct: 227 accctgctttcttattttcaaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 907
Length adjustment: 10
Effective length of query: 495
Effective length of database: 897
Effective search space: 444015
Effective search space used: 444015
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_e06.g1 MSMg01no384_e06.g1 CHROMAT_FILE:
MSMg01no384_e06.g1 PHD_FILE: MSMg01no384_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:32 2005
(526 letters)
>mm_chr9_28857168_28858093
Length = 926
Score = 975 bits (504), Expect = 0.0
Identities = 519/524 (99%)
Strand = Plus / Plus
Query: 3 atacaaaggatagaatgaagtgtagagactggtgtcgcagcattgacaggattcactggt 62
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 203 atacaaaggatagaatgaagtgtagagactggtgtcgcagcattgacaggaatcactggt 262
Query: 63 catagtcactgagggacgagtagaccctgggttcacactagagctaataaacttgagata 122
||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 263 catagtcactgagggactagtagaccctcagttcacactagaggtaataaacttgagata 322
Query: 123 tcagaatcttctttctgctccccctctcccttcaccatcctctgcctccttctcctttct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcagaatcttctttctgctccccctctcccttcaccatcctctgcctccttctcctttct 382
Query: 183 cttcctgtctgtgaggtttcaattttaactctgggcacatcactcagtttctcaatctgt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cttcctgtctgtgaggtttcaattttaactctgggcacatcactcagtttctcaatctgt 442
Query: 243 agtcagataagcacagaactgcttggacttcagtggtttgagaagtttctcttactgttg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agtcagataagcacagaactgcttggacttcagtggtttgagaagtttctcttactgttg 502
Query: 303 tcccatctgtctactttctgcttcttagctagccacttgggcagtgtgtgtaaagcccct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tcccatctgtctactttctgcttcttagctagccacttgggcagtgtgtgtaaagcccct 562
Query: 363 gatagccagcactgtcatctatcctgcaggtgaaacagctcagtaacatgagtatcagga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gatagccagcactgtcatctatcctgcaggtgaaacagctcagtaacatgagtatcagga 622
Query: 423 tgagtgatgccaagcaggacctgggtcaaacatactgaacacaggacagtttgaagacca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgagtgatgccaagcaggacctgggtcaaacatactgaacacaggacagtttgaagacca 682
Query: 483 cacacccaactctgcctcacctgtgatctgatgactaatgggaa 526
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cacacccaactctgcctcacctgtgatctgatgactaatgggaa 726
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
