Query= MSMg01no385_e23.b1 MSMg01no385_e23.b1 CHROMAT_FILE:
MSMg01no385_e23.b1 PHD_FILE: MSMg01no385_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:51 2005
(533 letters)
>mm_chr9_77620600_77621532
Length = 933
Score = 969 bits (501), Expect = 0.0
Identities = 522/529 (98%)
Strand = Plus / Minus
Query: 5 gaattcaccatgtagccaaagctggtctcaaaatcttcctaccacaacctccttagcaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 gaattcaccatgtagccaaagctggtctcaaaatcttcctaccacaacctccttagcaca 763
Query: 65 gagagtgcaggtgtacacccataccaggcagaagcaataatttaaaaggatattttgttc 124
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gagagtacaggtgtacacccataccaggcagaagcaataatttaaaaggatattttgttc 703
Query: 125 ttcagttaaaacatacagatgaacatttataaccacaggaaatggcacagcagtttagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ttcagttaaaacatacagatgaacatttataaccacaggaaatggcacagcagtttagaa 643
Query: 185 aaataaaagaaaacaaagtagccaactgaccaaccaagtagaccacttgcagttaatatt 244
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aaacaaaagaaaacaaagcagccaactgaccaaccaagtagaccacttgcagttaatatt 583
Query: 245 actagtcatctaaatgatggagttaggttcctgtcaagaatgggcgacactgacttaggt 304
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 actagtcatctaattgatggagttaggttcctgtcaagaatgggcgacactgacttaggt 523
Query: 305 gtgtgaaatgataatacaagatgttatgcccctcagttaatgtagtaaaaacaaaggctg 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 atgtgaaatgataatacaagatgttatgcccctcagttaatgtagtaaaaacaaaggctg 463
Query: 365 aagatggcaaggttgtccataacagacttccagtcagcatccagaccaggactgacagac 424
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 462 aagatggcaaggttgtccataacagaattccagtcagcatccagaccaggactgacagac 403
Query: 425 tcctcagcttgacactgttggagctgagaggtacatgaaactcactccctgaatcagtac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcctcagcttgacactgttggagctgagaggtacatgaaactcactccctgaatcagtac 343
Query: 485 tgttgtcgccacagatttgttacgctgtctgcaaatgagaacgagagaa 533
| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tattgtcgccacagatttgttacgctgtctgcaaatgagaacgagagaa 294
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_e23.g1 MSMg01no385_e23.g1 CHROMAT_FILE:
MSMg01no385_e23.g1 PHD_FILE: MSMg01no385_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:51 2005
(153 letters)
>mm_chr9_77424078_77424633
Length = 556
Score = 279 bits (144), Expect = 8e-80
Identities = 153/156 (98%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 1 caggccaatgtctcaaatgaacaaataaaagcctgtggctagagtggtctcaggccctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggccaatgtctcaaatgaacaaataaaagcctgtggctagagtggtctcaggccctgt 260
Query: 61 gatgaaatatattactgttgttgtgaaatgaacatggagacca-gtagcttctcaaa-ct 118
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 261 gatgaaatatattactgttgttgtgaaatgaacatggagaccaagtagcttctcaaaact 320
Query: 119 tgtgtttac-cccacagactagttctagtctcagcc 153
||||||||| ||||||||||||||||||||||||||
Sbjct: 321 tgtgtttacacccacagactagttctagtctcagcc 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 556
Length adjustment: 8
Effective length of query: 145
Effective length of database: 548
Effective search space: 79460
Effective search space used: 79460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
