CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCCTACTTTGCGACATCTAGCCTTCATAGGATCAAGGGCCTCTTC
TCCCATTGATGCCTGACAAGGCCATCTCCTGCTACATATACATCTGGAGC
CATGGGTCCCTCCTTGTGTACTCGTTGGTTGGTGGTTTTGACCCTGGGAG
CTCTGGTTGGCTGATATTGTTCTTCCTATGCAAACCCCTTCAGCTTCTTC
AGTCCTTTCTCTCACTCCTTCATTGGGAACCTCGTGATCAGTTCAATGGC
TGCCAGCATCTGTATTTGTATATGTTAGGCTCTGGCACAGCCTCTCAGGA
GATAGGTATATCAGGCTCCTGTCAGCATGCACTTCTAGGCATCTACAATT
GTATCTGCATTTGGTGACTGTATATGGGATAGATCCCCAGGTGGGGCAGT
CTCTGGATGGCCTTTCCTTCCATTTCTGTTGCACACTTTGTCTCTGTATT
TGCTCCCGTGAGTATTTTTCCCCTTCTAAGAAGGACTGAAGCACCACACT
TTGGTCTTCTTTCTTCTTGAGCTTCATGTGGTCTGTGAATTGTATCTTGG
GTATTCCAAGCATTTGAGCTAACATCCACTTACAGTGAGTGTATACTGTG
TGTGTTCTTTTGTGATCAGGTTACCTCACTCAGAATGGTATTTTCAAATT
CCATCCATTTGCCTAAGAATTTCATGAATTCATTATTTTTAATAGC

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCCTGGTGAAGAACAAACAATAAGAAGGTGATA
TAAATGAAATCCCCAAATAATAGGGGAGACAGAGTCACAACAGGACACCT
CTTGTGACTAAATAAAGCTTCAAGCATCAGGACAAGAGAAAATGACTTTG
AGGGGAGAGAGAGAAATAGCATCTCAATTGTAGCATGAAAATGTCTAAGG
AGAAGACAATGAGACTCCTGTGGAATCAGAATACAGGTCAGGAAAAAAGA
GCTGGGGACAAAATACTGCTATGAAAAGCAAAATGTTGAGAAGGATGAGT
TGGAAATACATGCAATCATTTTAATGTTAAAAATAGACCTCATTTTAGAA
ATGTTGGAGTTGAAGAAAGATTGCAATAGCAGCAGAGAAGCAGCCATGAA
CAGCAGACTTACTGTTTTTCTGTTTCTGACAATGCATGTTGCTTGGCATT
TTTAACAAGAGTGAGTTGTCAGTAAATTAGTTTACCACCATCATAGTCAT
CTTATTACCATCATCACCACCTCCACTATCATCATAATCATCACCATCTT
TGTTTCAAAAGTTACTTCTCTAATTCCTCAGGAACTAAACCTTGTCCTTT
GGCTTGGGCAGTAGGTGCTGAGGATTCTCACTGGCCCTGATTGATCTATT
TTTGCTCAAGAAAAAATTCAGCCCTAGGTTACATCTGATTGAG

Query= MSMg01no386_m16.g1 MSMg01no386_m16.g1 CHROMAT_FILE:
MSMg01no386_m16.g1 PHD_FILE: MSMg01no386_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:40 2005
         (675 letters)



>mm_chr9_35593058_35594134
          Length = 1077

 Score = 1245 bits (644), Expect = 0.0
 Identities = 669/678 (98%), Gaps = 3/678 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cctggtgaagaacaaacaataagaaggtgatataaatgaaatccccaaataataggggag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 cctggtgaagaacaaacaataagaaggtgatataaatgaaatccccaaataataggggag 724

                                                                       
Query: 61  acagagtcacaacaggacacctcttgtgactaaataaagcttcaagcatcaggacaagag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 acagagtcacaacaggacacctcttgtgactaaataaagcttcaagcatcaggacaagag 664

                                                                       
Query: 121 aaaatgactttgaggggagagagagaaatagcatctcaattgtagcatgaaaatgtctaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aaaatgactttgaggggagagagagaaatagcatctcaattgtagcatgaaaatgtctaa 604

                                                                       
Query: 181 ggagaagacaatgagactcctgtggaatcagaatacaggtcaggaaaaaagagctgggga 240
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 603 ggagaagacaatgagactcctgtggaatcagaatacaggtcaagaaaaaagagctgggga 544

                                                                       
Query: 241 caaaatactgctatgaaaagcaaaatgttgagaaggatgagttggaaatacatgcaatca 300
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 543 caaaatactgctatgaaaagcaaaatgtcgagaaggatgagttggaaatacatgcaatca 484

                                                                       
Query: 301 ttttaatgttaaaaatagacctcattttagaaatgttggagttgaagaaagattgcaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ttttaatgttaaaaatagacctcattttagaaatgttggagttgaagaaagattgcaata 424

                                                                       
Query: 361 gcagcagagaagcagccatgaacagcagacttactgtttttctgtttctgacaatgcatg 420
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gcagcagagaagcagccatgatcagcagacttactgtttttctgtttctgacaatgcatg 364

                                                                       
Query: 421 ttg--cttggcatttttaacaagagtgagttgtcagtaaattagtttaccaccatcatag 478
           |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttgctcttggcatttttaacaagagtgagttgtcagtaaattagtttaccaccatcatag 304

                                                                       
Query: 479 tcatcttattaccatcatcaccacctccactatcatcataatcatcaccatctttgtttc 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tcatcttattaccatcatcaccacctccactatcatcataatcatcaccatctttgtttc 244

                                                                       
Query: 539 aaaagttacttctctaattcctcaggaactaaaccttgtcctttggcttgggcagtaggt 598
           ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaaagttacttcaagaattcctcaggaactaaaccttgtcctttggcttgggcagtaggt 184

                                                                       
Query: 599 gctgaggattctcactggccctgattgatctatttttgctcaag-aaaaaattcagccct 657
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 183 gctgaggattctcactggccctgattgatctatttttgctcaagaaaaaaattcagccct 124

                             
Query: 658 aggttacatctgattgag 675
           ||||||||||||||||||
Sbjct: 123 aggttacatctgattgag 106


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1077
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1067
Effective search space:   709555
Effective search space used:   709555
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)