Query= MSMg01no387_c05.b1 MSMg01no387_c05.b1 CHROMAT_FILE:
MSMg01no387_c05.b1 PHD_FILE: MSMg01no387_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:06 2005
(271 letters)
>mm_chr9_103131878_103132547
Length = 670
Score = 458 bits (237), Expect = e-133
Identities = 259/267 (97%), Gaps = 3/267 (1%)
Strand = Plus / Plus
Query: 6 gaattctggctttaa-tcccacaccctagtctaagccaccagcgccaaaggcatccaagg 64
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctggcttcaaatcccacaccctagtctaagccaccagcgccaaaggcatccaagg 265
Query: 65 aggcatcagacaaaggagagatagcaggattagatctcaggaagttgtgactaccacacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aggcatcagacaaaggagagatagcaggattagatctcaggaagttgtgactaccacacc 325
Query: 125 atgctgtttggactatactgagaggccccgtgatagcgcctgggtaaactagttaaaagt 184
|||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||
Sbjct: 326 atgctgtttggactatactgag--gccccgggatagcgcctgggtaaactggttaaaagt 383
Query: 185 tttctaacattgcgtataccatatcttcaaattactggacataggggagacagcgtggtg 244
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 384 tttctaacatcgcgtataccatatcttcaaattactggacataggggagacagcgtgatg 443
Query: 245 aggatagtgaaaggtagagactgaatc 271
|||||||||||||||||||||||||||
Sbjct: 444 aggatagtgaaaggtagagactgaatc 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 670
Length adjustment: 9
Effective length of query: 262
Effective length of database: 661
Effective search space: 173182
Effective search space used: 173182
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no387_c05.g1 MSMg01no387_c05.g1 CHROMAT_FILE:
MSMg01no387_c05.g1 PHD_FILE: MSMg01no387_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:06 2005
(333 letters)
>mm_chr9_103276578_103277310
Length = 733
Score = 598 bits (309), Expect = e-175
Identities = 327/333 (98%)
Strand = Plus / Minus
Query: 1 caagacagccacggctaaatagaccctgtctcaaaaatataagtaaataagtaagtggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 caagacagccacggctaaatagaccctgtctcaaaaatataagtaaataagtaagtggaa 474
Query: 61 tggtatccttccaccggtggtgggtaggagcagggcatgatattcttagaagggagaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tggtatccttccaccggtggtgggtaggagcagggcatgatattcttagaagggagaaag 414
Query: 121 acatatgtgaagatccaaagatggatacagtgtgtcctggagctgcgggacctttatacg 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 413 acatatgtgaagatccaaagatggatacagtgtgtcctggagctgtgggacctttgtacg 354
Query: 181 tttttctggacacatagatgcaatggtgtgcactgtccatatgtacaacactgctgtcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tttttctggacacatagatgcaatggtgtgcactgtccatatgtacaacactgctgtcta 294
Query: 241 ggataataggctggtttgggaacattattagcagtggtagtggtggaaaatttctggcga 300
||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||
Sbjct: 293 ggataataggctggttttggaacattactagcagtggtagtggtggaaattttctggtga 234
Query: 301 catctaggattgttaggaagtgcttaagtttgg 333
|||||||||||||||||||||||||||||||||
Sbjct: 233 catctaggattgttaggaagtgcttaagtttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
