Query= MSMg01no387_o03.b1 MSMg01no387_o03.b1 CHROMAT_FILE:
MSMg01no387_o03.b1 PHD_FILE: MSMg01no387_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:04 2005
(346 letters)
>mm_chr9_100911320_100912065
Length = 746
Score = 623 bits (322), Expect = 0.0
Identities = 337/342 (98%)
Strand = Plus / Minus
Query: 1 aagagtctcccacctgaggccactgagctttgacactgaccacggtcaccggctgaggaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 542 aagagtctcccacctgaggccactgagctttgacactgaccacggtcaccagctgaggaa 483
Query: 61 ttcccagttcctcctcagtctgctccaaggctgcaatgccagctgccaaatgctaaggaa 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 482 ttcccagttcctcctcagtctgctccgaggctgcaatgccagctgccaaatgctaaggaa 423
Query: 121 taccaacttctttagcccgcgtaggagctgagcgcttgtggagctaagagccctgttacc 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 422 taccaacttctttagcccgcgtaggaactgagcgcttgtggagctaagagccctgttacc 363
Query: 181 tgaagcctgcatcagagctgtagcagtggggtaccacctgtgactgcttctaccttcctt 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgaagcctgcgtcagagctgtagcagtggggtaccacctgtgactgcttctaccttcctt 303
Query: 241 ctgttgcagcttgcttctgtcacatgccgagggacacagacactgcaaagcaacagccct 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 302 ctgttgcagcttgcttctgtcacatgccaagggacacagacactgcaaagcaacagccct 243
Query: 301 tgagcagttttcttctggcctgccatgatttctgtctgggca 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgagcagttttcttctggcctgccatgatttctgtctgggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_o03.g1 MSMg01no387_o03.g1 CHROMAT_FILE:
MSMg01no387_o03.g1 PHD_FILE: MSMg01no387_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:04 2005
(464 letters)
>mm_chr9_100733099_100733962
Length = 864
Score = 835 bits (432), Expect = 0.0
Identities = 457/469 (97%), Gaps = 7/469 (1%)
Strand = Plus / Plus
Query: 1 actatgtagatcatgccccacacttaaagggacctgcctgcccctgtgcctattgagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 actatgtagatcatgccccacacttaaagggacctgcctgcccctgtgcctattgagtct 257
Query: 61 gagattgatgacttgtgctagtgtgccacacccatatgtgttg-----tgttttgttttg 115
||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 258 gagattgatgacttgtgctagtgtgccacaccc--atgtgttgtgttttgttttgttttg 315
Query: 116 ttttgttttaagttagggctaataatctgataagaaaaaaagataaaattaatttttttg 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ttttgttttaagttagggctaataatctgataagaaaaaaagataaaattaatttttttg 375
Query: 176 agaaattatcttagagtaggaatatcatcgcaggacaactacattaatgcatgcttgaga 235
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 376 agaaattatcttagagtaggaaaatcatcgcaggacaactacattaatgcatgcttgaga 435
Query: 236 taaatggatatatttctaaaatgtatgagttttctgcctcttttttattttaactaatat 295
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 taaatggatataattctaaaatgtatgagttttctgcctcttttttattttaactaatat 495
Query: 296 ggatgattcttcactgttcagcctaaaacataaagtaactaatgatgaaagacctgtaat 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggatgattcttcactgttcagcctaaaacataaagtaactaatgatgaaagacctgtaat 555
Query: 356 atgaatgaagtgatgagatgtgtttcgtanaaatacaagctaaactacagattttcttac 415
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 556 atgaatgaagtgatgagatgtgtttcgtagaaatacaagctaaactacagattttcttac 615
Query: 416 aattcagtaaatgtctcacagggttttagttttgtaaattattttacat 464
|||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 616 aattcagtaaatgtctcaaagggttttagctttgtaaattattttacat 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
