Query= MSMg01no388_e17.b1 MSMg01no388_e17.b1 CHROMAT_FILE:
MSMg01no388_e17.b1 PHD_FILE: MSMg01no388_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:36 2005
(464 letters)
>mm_chr9_122704648_122705511
Length = 864
Score = 866 bits (448), Expect = 0.0
Identities = 457/460 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaggctagcctggtctacagagagagctccaggacagccagacctacacaggaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaggctagcctggtctacagagagagctccaggacagccagacctacacaggaa 264
Query: 65 aaccctatctcagagaaaaacagtaattagatgtgttaataattcgaaatataacatgcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaccctatctcagagaaaaacagtaattagatgtgttaataattcgaaatataacatgcc 324
Query: 125 aaattaaactcaggtaatccagctttagaaggcaggttcagctactgtgggaactcttgg 184
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 aaattaaattcaggtaatccagctttagaaggcaggttcagctactgtggaaactcttgg 384
Query: 185 tcatgacttcatggcccctatgttaacatgtataagtgccttcaaacaagatacttatgc 244
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcatgacttcacggcccctatgttaacatgtataagtgccttcaaacaagatacttatgc 444
Query: 245 ccacctgtgattaccctgagaagtgtcattgtcatggtatgcttattttttcttttggga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccacctgtgattaccctgagaagtgtcattgtcatggtatgcttattttttcttttggga 504
Query: 305 gaatcggaatggataatcaacacaccactttggccttgtgatagaatggatgtgcttaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaatcggaatggataatcaacacaccactttggccttgtgatagaatggatgtgcttaat 564
Query: 365 cggcataatttgctctgtaccattgcacatgaaatcttgggcaagaatctttacaaacaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cggcataatttgctctgtaccattgcacatgaaatcttgggcaagaatctttacaaacaa 624
Query: 425 acatttgaggtcttacggaatctaccaagctttcagaatt 464
||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acatttgaggtcttacggaatctaccaagctttcagaatt 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_e17.g1 MSMg01no388_e17.g1 CHROMAT_FILE:
MSMg01no388_e17.g1 PHD_FILE: MSMg01no388_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:36 2005
(432 letters)
>mm_chr9_122913903_122914734
Length = 832
Score = 569 bits (294), Expect = e-166
Identities = 346/378 (91%), Gaps = 26/378 (6%)
Strand = Plus / Minus
Query: 53 tggcctccacatgtacctccccaaacacaaacacacacacacacacacacacacacacac 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 tggcctccacatgtacctccccaaacacaaacacacacacacacacacacacacacacac 773
Query: 113 acacacacacacacacacacacacacacacacacaccacacgtacgtttgttttccaaaa 172
|||||| | ||| ||||||| |||||||||||||||||
Sbjct: 772 acacac-----------------c-cac-cacacac-------acgtttgttttccaaaa 739
Query: 173 cagggtttctctgtataacagggtcctgggtccatgcagatctcgaactcacagagctcg 232
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cagggtttctctgtataacagggtcctgggtccatgcagatctcgaactcacagagctcc 679
Query: 233 acttgtctctgcctctcaagtgctgggattaaagccatcacaccggctgacttgaagctt 292
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 actcgtctctgcctcccaagtgctgggattaaagccatcacaccggctgacttgaagctt 619
Query: 293 ttttgttttatgtttgtttgtgtgtatgtattttatgtttatacctggaccccccctttc 352
|||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 618 ttttgttttatgtttgtttgtgtgtatgcattttatgtttatacctggattccccctttc 559
Query: 353 cctctctgtccttccttttaagacaggctcactgggtaactctggctgacatggaccttc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cctctctgtccttccttttaagacaggctcactgggtaactctggctgacatggaccttc 499
Query: 413 ctgtgtacacttgctttg 430
||||||||||||||||||
Sbjct: 498 ctgtgtacacttgctttg 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
