TTAATCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATC
CGCGGAATTCTTTGTTTTGTTCTGAGCCCCATTTTTTAATGGGGTTATTT
GATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAG
TCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTG
GTCTTTTTGTCTTATTGACGGTGTCGAAAACTGACTTTTTTAAAATTTTA
CTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTGAGTGTAT
GGTGGAAGAGTGAAAATGGGTCAAAAGTTTTGGAAGGAAGGAGGGAGGGA
GCTTCCCCCCTTCTTCTTCTTCTCCCTTCTTTTTTCCTCGTGCCCGTCCT
TCTCCGTCTCCCTTCTGCCACATTCCTCTACTCTCCTTCGCCTCCCTTTC
TTCCTCTCCGTCCCTTATTCCCGGTCTTGTTCAGATCACTTTCATCGCAC
TCCCCTCTTCTTCATCTTCTCCCTTTTCCTCCTCATTCGCCCCTCTTTTT
CCCCCCCTTCTCCCCCCTTCTCTTCTCCCTCCTTCCCTTCCGCCTCTTTC
TCCCCTCCCCTCTCTCCTCTTCTCTTCCCCCTCCTTCCCCCTTCTCCCTC
CATTTTTCCTTCTCCTCCTCTCTGCCTTCTCTCCCTCTTCCCCCCATTCC
GTCCGTCTTTCTCCCCCTTTCACACTTTTCTCCTTCTTTCTCCCGCCCTC
CTCTCTCTTCCCCCTTCCCCTCCCCCACCCCTCTCCTCATTTTCCTCCTT
TTCCTCCCTCCTCCTTTCTCCTN

NCGACGGCCGAGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGAGATAAGTTCTCC
TAGGGATGAAGGGGCAGGGGCGCTTCTTGGAAGGCAGATCATTAAGATTT
AATGGGACATTTTCTGCCAGACAAGGGGATTGTAAAACACAGCTAATTTA
AAGAGCTGGGGGATCGCAGAGTCATTTTGCTTGCTGACTAGAAAAGGCCA
GACATGAAATTATGTCAGTCCCTGCCCTCCTGTCTCCTGTCTTCTCAGCT
ACAGGTCCTGGCTGCCAAGGAGTACAGGCCCCTGTGCATGCACCACCACT
ACCATCTTGGCCAGGACTGCAGCCACAGCCCAGACCACCTTTCAATATTT
GTACGCTTTGTGGCCAGTTGCCAGAGCTGTGATTGGAAGAAATGAGTTGG
CAAAGGAGTAGTGGCAGTGTGTGCATACATGTGTGTATGTAAGTGTATGA
ATGCAGGAAACAGATGTAGAGTGAGACAGAGAGCAAGGTGGAGGGACAGA
AAAGGAGGCGGGAGGAGAAAGAGAGAGGACCAAGAGGACATTGTCCCTAC
TCTTGGGGTTGGGTTACTTGGGGAAAGCTGGTCTTAACTGCGTGTCTGCC
CCCTGCTGCACCAGGTGCGACCATTTGAGAAAATAAATGGGCACAGCCCT
GGGGCACAAAAGGACGCGTGCATATGGGGCCTCCCCCCCCCTGGCC

Query= MSMg01no390_f02.g1 MSMg01no390_f02.g1 CHROMAT_FILE:
MSMg01no390_f02.g1 PHD_FILE: MSMg01no390_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:12 2005
         (524 letters)



>mm_chr9_42691937_42692860
          Length = 924

 Score =  982 bits (508), Expect = 0.0
 Identities = 520/524 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagagataagttctcctagggatgaaggggcaggggcgcttcttggaaggcagatcatta 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 724 tagagataagttctcctagggatgaaggggcagggacgcttcttggaaggcagatcatta 665

                                                                       
Query: 61  agatttaatgggacattttctgccagacaaggggattgtaaaacacagctaatttaaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 agatttaatgggacattttctgccagacaaggggattgtaaaacacagctaatttaaaga 605

                                                                       
Query: 121 gctgggggatcgcagagtcattttgcttgctgactagaaaaggccagacatgaaattatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gctgggggatcgcagagtcattttgcttgctgactagaaaaggccagacatgaaattatg 545

                                                                       
Query: 181 tcagtccctgccctcctgtctcctgtcttctcagctacaggtcctggctgccaaggagta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcagtccctgccctcctgtctcctgtcttctcagctacaggtcctggctgccaaggagta 485

                                                                       
Query: 241 caggcccctgtgcatgcaccaccactaccatcttggccaggactgcagccacagcccaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 caggcccctgtgcatgcaccaccactaccatcttggccaggactgcagccacagcccaga 425

                                                                       
Query: 301 ccacctttcaatatttgtacgctttgtggccagttgccagagctgtgattggaagaaatg 360
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ccacctttcaatatttgtactctttgtggccagttgccagagctgtgattggaagaaatg 365

                                                                       
Query: 361 agttggcaaaggagtagtggcagtgtgtgcatacatgtgtgtatgtaagtgtatgaatgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agttggcaaaggagtagtggcagtgtgtgcatacatgtgtgtatgtaagtgtatgaatgc 305

                                                                       
Query: 421 aggaaacagatgtagagtgagacagagagcaaggtggagggacagaaaaggaggcgggag 480
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 304 aggaaacagatgtagagtgagacagagagcgaggtggagggacagaaaaggaggcgggag 245

                                                       
Query: 481 gagaaagagagaggaccaagaggacattgtccctactcttgggg 524
           ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 244 gagaaagagagaggaccaagaggacattgtccctattcttgggg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space:   469796
Effective search space used:   469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)