Query= MSMg01no390_h23.b1 MSMg01no390_h23.b1 CHROMAT_FILE:
MSMg01no390_h23.b1 PHD_FILE: MSMg01no390_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:26 2005
(401 letters)
>mm_chr9_41550110_41550910
Length = 801
Score = 756 bits (391), Expect = 0.0
Identities = 397/401 (99%), Gaps = 4/401 (0%)
Strand = Plus / Plus
Query: 1 ccaacaacagcaccacaaagccatgtaccattaacaaaccttcaggtatacatcctaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaacaacagcaccacaaagccatgtaccattaacaaaccttcaggtatacatcctaatt 260
Query: 61 ctagaacaccagagatctacagaataccttctggctcttacagaattgttctgcccagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctagaacaccagagatctacagaataccttctggctcttacagaattgttctgcccagtt 320
Query: 121 tgggaatccaatcagcagattgcccccacctatacaaatagcccatggttctacagtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggaatccaatcagcagattgcccccacctatacaaatagcccatggttctacagtgtg 380
Query: 181 aatctaaaatgttgcctaaagcccatgtgttaaaagctttttctccaaggtggttctgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatctaaaatgttgcctaaagcccatgtgttaaaagctttttctccaaggtggttctgta 440
Query: 241 ggacattgtataagagtccggtaggtcttcaggtaacttggtggcatgtcttcaaacata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggacattgtataagagtccggtaggtcttcaggtaacttggtggcatgtcttcaaacata 500
Query: 301 atactagaccgtagcctcttttccttccttccttctttccttccttccttccttccttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atactagaccgtagcctcttttccttccttccttctttccttccttccttccttccttcc 560
Query: 361 ttccttccttccttccttccttccttccttcattttttttt 401
||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 ttccttccttccttccttccttccttc----attttttttt 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_h23.g1 MSMg01no390_h23.g1 CHROMAT_FILE:
MSMg01no390_h23.g1 PHD_FILE: MSMg01no390_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:26 2005
(405 letters)
>mm_chr9_41720152_41720956
Length = 805
Score = 783 bits (405), Expect = 0.0
Identities = 405/405 (100%)
Strand = Plus / Minus
Query: 1 aacaccaaagcattttggctcctctgaataggccattctcgatatagagaggctctggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aacaccaaagcattttggctcctctgaataggccattctcgatatagagaggctctggaa 415
Query: 61 tacaatggacaggatgcatcttttggacttagcctttctccctgggggagggcatttgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tacaatggacaggatgcatcttttggacttagcctttctccctgggggagggcatttgac 355
Query: 121 ataaaactaataatggaatatattctaatagtacgttgggctgtggccaggatgggtctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ataaaactaataatggaatatattctaatagtacgttgggctgtggccaggatgggtctg 295
Query: 181 gggttgcatggataaaggagaggagggacacgagatggggcaggactgaggaactaaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gggttgcatggataaaggagaggagggacacgagatggggcaggactgaggaactaaagt 235
Query: 241 attgttcctcagagaactgggccgggggttggaatgaaagaccccaccataaggcttagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 attgttcctcagagaactgggccgggggttggaatgaaagaccccaccataaggcttagc 175
Query: 301 aagctagctgcagtaacgccattttgcaaggcatgaaaaagtaccagagctgagttctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 aagctagctgcagtaacgccattttgcaaggcatgaaaaagtaccagagctgagttctca 115
Query: 361 aaagttacaaggaagttcagttaaagattaacagttaaaaatcaa 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 aaagttacaaggaagttcagttaaagattaacagttaaaaatcaa 70
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
