Query= MSMg01no391_d23.b1 MSMg01no391_d23.b1 CHROMAT_FILE:
MSMg01no391_d23.b1 PHD_FILE: MSMg01no391_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:23 2005
(416 letters)
>mm_chr9_27936985_27937800
Length = 816
Score = 797 bits (412), Expect = 0.0
Identities = 415/416 (99%)
Strand = Plus / Minus
Query: 1 gcactgcaggaagtattgatctggcaaaagctggaggccttccagcaagtttgagccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gcactgcaggaagtattgatctggcaaaagctggaggccttccagcaagtttgagccatc 557
Query: 61 ctctcacaggtgcccatatgcaattgactttaccaacttcttgcttcaatggagcaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ctctcacaggtgcccatatgcaattgactttaccaacttcttgcttcaatggagcaagca 497
Query: 121 tgaactcagtaaaaacggctctccaattagcctttagtcagagagcaagtaagaggttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgaactcagtaaaaacggctctccaattagcctttagtcagagagcaagtaagaggttgg 437
Query: 181 aagaagagacatgtaccagggcttagaaaaaaaggaaaagctagatactaaatgtttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aagaagagacatgtaccagggcttagaaaaaaaggaaaagctagatactaaatgtttttc 377
Query: 241 tctgggactctactactggactcttaggtctattttaaagacataattatcaacccagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tctgggactctactactggactcttaggtctattttaaagacataattatcaacccagac 317
Query: 301 aagctatttctaagggactcctgtatcatttaagatagccaaatttgttacgcaataaga 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 316 aagctatttctaagggactcctgtatcatttaagatagccatatttgttacgcaataaga 257
Query: 361 agatagatgagattaggatttttcagctttgttggagcaaacaaaatattacttgg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agatagatgagattaggatttttcagctttgttggagcaaacaaaatattacttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_d23.g1 MSMg01no391_d23.g1 CHROMAT_FILE:
MSMg01no391_d23.g1 PHD_FILE: MSMg01no391_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:24 2005
(424 letters)
>mm_chr9_27792838_27793662
Length = 825
Score = 760 bits (393), Expect = 0.0
Identities = 417/425 (98%), Gaps = 1/425 (0%)
Strand = Plus / Plus
Query: 1 ctgacaatagagatcaagaaatgaagcaaatttcattaagccagatgtgacagggtggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgacaatagagatcaagaaatgaagcaaatttcattaagccagatgtgacagggtggaa 260
Query: 61 gggactcagtgttcacttaagaactgggctctggctctggatcatttccacttcatgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggactcagtgttcacttaagaactgggctctggctctggatcatttccacttcatgttc 320
Query: 121 cttactaagagttggtggccagataaatacttttgggagacaaacataccgcatttcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttactaagagttggtggccagataaatacttttgggagacaaacataccgcatttcttc 380
Query: 181 ttggaggtatgtgttccacgttaagaactgaagacaaactaattttatttgtttgactca 240
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 ttagaggtatgtgttccacgttaagaactgaagacgaactaattttatttgtttgactca 440
Query: 241 gggtttcccaaatgtcattgatgattgcccacttttttagagtccatattttaaacaccc 300
|||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 gggttttccaaatgccattgatgactgcccacttttttagagtccatattttaaacaccc 500
Query: 301 atgtagaaatactttggtacacatatcttctttccattttattgcagataccaagaaatc 360
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 501 atgtagaaatactttggtacagatatcttctttccattttattgtagataccaagaaatc 560
Query: 361 ctgaattctgtgaaaaaaaaaa-taatgtgactttggtgtgatggaggcctgtctagatg 419
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgaattctgtgaaaaaaaaaaataatgtgactttggtgtgatggaggcctgtctagatg 620
Query: 420 tggca 424
|||||
Sbjct: 621 tggca 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 825
Length adjustment: 9
Effective length of query: 415
Effective length of database: 816
Effective search space: 338640
Effective search space used: 338640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
