Query= MSMg01no392_k22.b1 MSMg01no392_k22.b1 CHROMAT_FILE:
MSMg01no392_k22.b1 PHD_FILE: MSMg01no392_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:17 2005
(234 letters)
>mm_chr9_120111872_120112503
Length = 632
Score = 387 bits (200), Expect = e-112
Identities = 224/234 (95%), Gaps = 6/234 (2%)
Strand = Plus / Minus
Query: 1 ttcttgctatctgcttgctgggttgctgaaattctctagttttatccttgtttgttgcag 60
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttcttgctatc----tgctgggttgctgaaattctctagttttatccttgtttgttgcag 388
Query: 61 atatttgttcgttttcattgatatgagagaaggcaacatctattctgaacacacttcatc 120
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 387 atatttgttcattttcattgatatgagagaaggcaacatccattctgaacacacttcatc 328
Query: 121 ctaaaacagctagttctaccacacctctgacatcactagccaattacaatagtttactga 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 327 ctaaaacagctagttctaccacacctct-acatcactagccaattacaatagtttactga 269
Query: 181 cataactacttgggtttttttgtttgtttgttttttggtttttggtttttttcc 234
||||||||||| |||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 268 cataactactt-ggtttttttgtttgtttggtttttgggttttggtttttttcc 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 632
Length adjustment: 9
Effective length of query: 225
Effective length of database: 623
Effective search space: 140175
Effective search space used: 140175
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no392_k22.g1 MSMg01no392_k22.g1 CHROMAT_FILE:
MSMg01no392_k22.g1 PHD_FILE: MSMg01no392_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:17 2005
(245 letters)
>mm_chr9_119919980_119920624
Length = 645
Score = 474 bits (245), Expect = e-138
Identities = 245/245 (100%)
Strand = Plus / Plus
Query: 1 cagacgctggcaaggacagagcatcgagggaccaggcgccctcccgggtgagccccggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagacgctggcaaggacagagcatcgagggaccaggcgccctcccgggtgagccccggaa 260
Query: 61 ccggcatccgtttggaatctgggagggaggctccgcgcgagggctggccgggacggcgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccggcatccgtttggaatctgggagggaggctccgcgcgagggctggccgggacggcgcg 320
Query: 121 tcctggcgcccggcgtctgctcgcagagccagccctggcagcacgcctgccgggcgtttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctggcgcccggcgtctgctcgcagagccagccctggcagcacgcctgccgggcgtttc 380
Query: 181 ctggcaaccagccaccgcctgaacgttccgaactctacagcccgcgacgtcaccgtcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggcaaccagccaccgcctgaacgttccgaactctacagcccgcgacgtcaccgtcacc 440
Query: 241 ttgac 245
|||||
Sbjct: 441 ttgac 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
