NCCCTTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCAAACTGTACCATTTTATTTATTATAGTTTATTTTGATT
TGTTTTGGTTGTTTTGATTTTTTTTTCTTTCTCTCTTAAGACTGAGAATC
AATGTGCAGCCCAGTCTGGCTTAGGATTTAGAGTCCATCCATCCGAGCCT
CCCAAGTCACCTGGCTTGATTGATCTTACTAGTAAGTGTGGCTGCATGTA
TACTTCACAATCATTCTTTCCTGATGTGTAAACTCTATAAGCATGAGCCA
TTGTAACGCAATTATCTAAAAGAGGGAAATTTGTCCCTCTCCTGTGTAGC
TAGTACATGTCACACTGAAATGTTTGGTGTCCTTTTGTTATTTTTTTCTC
TGTCCATATCTGTGTCTCTTCTATGCATGGGTGGGTGTGTTCCCATTGTT
AGAAGTTTTGCGGCAAAGAATCACAATGCCCCGAAAATGCTGCTTGTTTA
TATTACTATCACGGGTGCTGGGTATGCACAGATGTATACCATACAGAGGT
GATTCCTAATTGATATAATTCCTCACTCAGTGAGCAGGTGTCTCTGTGAT
ACTGTGATGCTCTAAGAGCATAGCTTTTAAACTGATAACCGATCTTTACC
GCAGGGGGGTGTCTATTAAAAATTCCTACCTCCTTGGCCCTCAAAATTTA
TTTTTTTTTCTTTTTTCTCCTCCGCGGGCCCCTTTCTAAGATTTTCTGTG
GAACCCGGCCCCGGCTTTTATTTTGCCACC

TTTTTTTTCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTTTAGAATGCTC
TATACCGCACTTTTTAAACTGGGTTATTTGTATTATTGGTGTCTAACTTT
TTGAGTTCTTTATATATTTTGAATATTATCTCTCTGTCAGATGCAGGGTT
GATGAAGATGTTTTCTCAATCTGTAGCCTACCATTTTGTCCAATGAACAG
TGCCTTTTGCCTTACAGAAATTTTTCAGATTCATAAGCTCCCATTTATTA
ATTGTTGATCTTAGTGCCTGAGCCATTGGTGTTGTGTTTAGAAATTTGTC
TCCTATATCAGTGAGTTCAAGGCTACTACTTTTTTTCCTGTTATATTTAG
TTTATCTGATTTTATGTTGAGATCTTTGATCCACTTGGACTTGACTTTTG
TACTGGGTGATACATATAGATCTATTTGCATTCTTCTACATGCAGACATC
CAATTAGAACAGCTCCAATAGTTGAAGATGTTTGTCTCTATTCCATTGTA
TGGCTTAGGGTTCTTTGTCAAATATCAAGTGTTCATAAGTGTGTGGGTTT
ATTTTCTAGGCTTTTGGTCTGTTTCCTTTTATCCACCTGGCTGTTTCTAT
GGCCATTACCCGTGAGTTTTTATCATTATCTTCTTTCCCCTCACCTTTGT
TACCTTTGTCTCGCGTATACTTCCCCCAAATTCCTTTTTTTGCTTGCAAA
CCGATTTTATTTGCCCCTTG

Query= MSMg01no394_b07.b1 MSMg01no394_b07.b1 CHROMAT_FILE:
MSMg01no394_b07.b1 PHD_FILE: MSMg01no394_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:19 2005
         (545 letters)



>mm_chr9_76100659_76101603
          Length = 945

 Score = 1017 bits (526), Expect = 0.0
 Identities = 538/542 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaaactgtaccattttatttattatagtttattttgatttgttttggttgtttt 63
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaactgtaaaattttatttattatagtttattttgatttgttttggttgtttt 263

                                                                       
Query: 64  gatttttttttctttctctcttaagactgagaatcaatgtgcagcccagtctggcttagg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gatttttttttctttctctcttaagactgagaatcaatgtgcagcccagtctggcttagg 323

                                                                       
Query: 124 atttagagtccatccatccgagcctcccaagtcacctggcttgattgatcttactagtaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atttagagtccatccatccgagcctcccaagtcacctggcttgattgatcttactagtaa 383

                                                                       
Query: 184 gtgtggctgcatgtatacttcacaatcattctttcctgatgtgtaaactctataagcatg 243
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtgtggctgcatgtatatttcacaatcattctttcctgatgtgtaaactctataagcatg 443

                                                                       
Query: 244 agccattgtaacgcaattatctaaaagagggaaatttgtccctctcctgtgtagctagta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agccattgtaacgcaattatctaaaagagggaaatttgtccctctcctgtgtagctagta 503

                                                                       
Query: 304 catgtcacactgaaatgtttggtgtccttttgttatttttttctctgtccatatctgtgt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 catgtcacactgaaatgtttggtgtccttttgttatttttttctctgtccatatctgtgt 563

                                                                       
Query: 364 ctcttctatgcatgggtgggtgtgttcccattgttagaagttttgcggcaaagaatcaca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctcttctatgcatgggtgggtgtgttcccattgttagaagttttgcggcaaagaatcaca 623

                                                                       
Query: 424 atgccccgaaaatgctgcttgtttatattactatcacgggtgctgggtatgcacagatgt 483
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgcctcgaaaatgctgcttgtttatattactatcacgggtgctgggtatgcacagatgt 683

                                                                       
Query: 484 ataccatacagaggtgattcctaattgatataattcctcactcagtgagcaggtgtctct 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ataccatacagaggtgattcctaattgatataattcctcactcagtgagcaggtgtctct 743

             
Query: 544 gt 545
           ||
Sbjct: 744 gt 745


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)