Query= MSMg01no394_d23.b1 MSMg01no394_d23.b1 CHROMAT_FILE:
MSMg01no394_d23.b1 PHD_FILE: MSMg01no394_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:34 2005
(460 letters)
>mm_chr9_86397586_86398445
Length = 860
Score = 872 bits (451), Expect = 0.0
Identities = 454/455 (99%)
Strand = Plus / Plus
Query: 6 aatcctagaagatgttctgattgaggtgtttagaactttgtattctcagtgcaaagcaga 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aatcctagaagatgttctgattgaggtgtttagaactttgtattctcagtgcaaagcaga 265
Query: 66 attggatcttcagatggaaccacccttcagcaaggaccatgctcaattaagcaggtagat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 attggatcttcagatggaaccacccttcagcaaggaccatgctcaattaagcaggtagat 325
Query: 126 tgctaaaacttaagacttaaagatggactcattattagtgcttatgaaatggactctact 185
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgctaaaacttaagacataaagatggactcattattagtgcttatgaaatggactctact 385
Query: 186 atatgaattcatataatgagattattagtaatggctagggagtttactctaaagtttata 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atatgaattcatataatgagattattagtaatggctagggagtttactctaaagtttata 445
Query: 246 ttatgataaataaaattatcactttgttagtatgaagtataattaattgtactcattaat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttatgataaataaaattatcactttgttagtatgaagtataattaattgtactcattaat 505
Query: 306 taaaaaggtactttaaacaagacagtaatcattacttgattacttgattgattcttaatt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 taaaaaggtactttaaacaagacagtaatcattacttgattacttgattgattcttaatt 565
Query: 366 ataccagtttgggaaattaatgtcaagatggctcagaggttaaagaaagacacttggctc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ataccagtttgggaaattaatgtcaagatggctcagaggttaaagaaagacacttggctc 625
Query: 426 caagcctgactcttgcgttctatccactggagtca 460
|||||||||||||||||||||||||||||||||||
Sbjct: 626 caagcctgactcttgcgttctatccactggagtca 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_d23.g1 MSMg01no394_d23.g1 CHROMAT_FILE:
MSMg01no394_d23.g1 PHD_FILE: MSMg01no394_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:34 2005
(406 letters)
>mm_chr9_86460117_86460922
Length = 806
Score = 658 bits (340), Expect = 0.0
Identities = 353/362 (97%), Gaps = 8/362 (2%)
Strand = Plus / Minus
Query: 1 aaaggatttcaggatttggttaaggttagagctatgaaaaataacttttgggtctctagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaaggatttcaggatttggttaaggttagagctatgaaaaataacttttgggtctctagg 303
Query: 61 ttgatcaggcaggtacaggacatgtccttatgatattgtttgggtctagggttgttcaga 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 302 ttgatcaggcaggtacaggacatgtctttatgatattgtttgggtctagggttgttcaga 243
Query: 121 gattcatcagcctgaccattaataaattttaaaagaagcagcagccgggcatggtggcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gattcatcagcctgaccattaataaattttaaaagaagcagcagccgggcatggtggcat 183
Query: 181 gtctttaatcccagcacttgggaggcagaggcaggcggatttctgagttcaaggccagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtctttaatcccagcacttgggaggcagaggcaggcggatttctgagttcaaggccagcc 123
Query: 241 tggtatacaatgtgagttccagggcagccaggactacacagagaaaccctgtcttgaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tggtatacaatgtgagttccagggcagccaggactacacagagaaaccctgtcttgaaaa 63
Query: 301 acc--------aaaaaaaaaaaaaaagcagcagctttattcatatactggtaccaggtct 352
||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 accaaaaaaaaaaaaaaaaaaaaaaagcagcagctttattcatatactggtaccaggtct 3
Query: 353 ac 354
||
Sbjct: 2 ac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
