Query= MSMg01no395_i20.b1 MSMg01no395_i20.b1 CHROMAT_FILE:
MSMg01no395_i20.b1 PHD_FILE: MSMg01no395_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:26 2005
(516 letters)
>mm_chr9_92024550_92025470
Length = 921
Score = 924 bits (478), Expect = 0.0
Identities = 507/518 (97%), Gaps = 5/518 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgcttttc-catatgacctgggaaacacttgttctccatgcttagaaaaactt 62
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggaattctgctttacaaatatgacctgggaaacacttgttctccatgcttagaaaaactt 662
Query: 63 tcatccataacaatactgtagtattctagatttggaaaaaaattaaatattcctacagtc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcatccataacaatactgtagtattctagatttggaaaaaaattaaatattcctacagtc 602
Query: 123 atcaatttggggatgcagggggtggggagtaacaggacagactatggctgtgtgttacca 182
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 601 atcaatttggggatgcagggggtagggagtaacaggacagactatggccgtgtgttacca 542
Query: 183 gacttttctattaatatattaatggctgcacagatatgcatgcgtatggaaaatatatct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gacttttctattaatatattaatggctgcacagatatgcatgcgtatggaaaatatatct 482
Query: 243 catctccaacgaagatttcagaaaatcccctctaaaatgtattttttttcaaaaa--tgt 300
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||
Sbjct: 481 catctccaacgaagatttcagaaaatcccctcgaaaatgtattttttttaaaaaaaatgt 422
Query: 301 ctgcctaatcccaagattctccactcatttttttcgtagctgggatatagttagctcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctgcctaatcccaagattctccactcatttttttcgtagctgggatatagttagctcaga 362
Query: 361 gaaaggcttaaagaataaatgctagaatgatagctcatgtatcagtttaattgaaactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaaggcttaaagaataaatgctagaatgatagctcatgtatcagtttaattgaaactga 302
Query: 421 tttttttt--ccaaaaatagtcaagtagatcacatgaacgaaaatgttaatgaaacactc 478
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttttttttttccaaaaatagtcaagtagatcacatgaacgaaaatgttaatgaaacactc 242
Query: 479 ttctggttcaattataatatgctaataagatagtgtat 516
||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttctggttcaattataatatgctaataagatagtgtat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 921
Length adjustment: 10
Effective length of query: 506
Effective length of database: 911
Effective search space: 460966
Effective search space used: 460966
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_i20.g1 MSMg01no395_i20.g1 CHROMAT_FILE:
MSMg01no395_i20.g1 PHD_FILE: MSMg01no395_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:26 2005
(474 letters)
>mm_chr9_91888027_91888904
Length = 878
Score = 716 bits (370), Expect = 0.0
Identities = 441/478 (92%), Gaps = 24/478 (5%)
Strand = Plus / Plus
Query: 1 agaattggtgaagatactgagcagtgttgagaatgaag---gagtgtgtgagctacttag 57
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 agaattggtgaagatactgagcagtgttgagaatgaagaaggagtgtgtgagctacttag 260
Query: 58 ggtggctaccttggagaaactgatagagtcgttttccaccttcctgtaacacaagggaat 117
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 ggtggctaccttggagaaactgatagagtcgttttccaccttcctgtaaaacaagggaat 320
Query: 118 aggctgtgtgacctgtgtgatgtgagacttcaaataaatttattatctaggaacagaccc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggctgtgtgacctgtgtgatgtgagacttcaaataaatttattatctaggaacagaccc 380
Query: 178 ttattgtacaataaaaagagagactgagagctccaagtataaaatttgggttccaatcaa 237
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 ttattgtacaataaaaagagagactgagagctccaagtataaaaattgggttccaatcaa 440
Query: 238 tagcttttgttgcttccaatagttatcaaacacagaaattgatctaaaaa-gctgattat 296
|||| ||| |||||||||||||| || ||||||||||||||||||||| |||||||||
Sbjct: 441 tagcaattgcagcttccaatagttaccacacacagaaattgatctaaaaaagctgattat 500
Query: 297 caaaaagatctaagatctgtgtgtaaactacagaaccagcttgaaaagggtgttctcaca 356
||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 caaaaagctgtaagatctgtgtgtaaactacagaaccagcttgaaaaaggtgttctcaca 560
Query: 357 caataggaaccacagacagacagacactcacacacacacacacacacacacacacacaca 416
|||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 561 caataggaaccacagacagacagacag------------------acagacacacacaca 602
Query: 417 cacacttttactaaatgtgagttgtaattttaaaagtaaaatattgcaaaggaggttt 474
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 603 cacacttttactaaatgtgagttgt--ttttaaaagtaaaatattgcaaaggaggttt 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 878
Length adjustment: 10
Effective length of query: 464
Effective length of database: 868
Effective search space: 402752
Effective search space used: 402752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
