XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCACCA
GCTGTCGAGGAGTGTTCCTCTTTCTCCATATTCTTACCAGGATCTGCTGT
TATCTGAGTTTTTGATCTTAGCCATTCTTACTGGTGTGGTAGAATCTCAG
GGTTGTTTTGATTTGCATTTCCCTGATGACTAAGGATGTTGAACATTTCT
TTAAGTGATTCTTAGCCATTTAAGATTCCCCTGTTGAAAATTTTCTGTTT
AGCTCTATACTCCATTTTTAATAGGGATATTTGTTTCTCGGGAGTCTTTC
TTCTTGAGTTCTTATTAAATTTCTGATATTAGCCCTCTATCAGATGTAAG
ATTGGTAAAGATTTTTTTCCCAATCTGTGGATTGTAGTTTTGTCCTGTTA
ACAGTCGTCCTTTGTCTTATAGAAGCGCTTCAATTCATGATGACCCATTT
GTCTATTCTTGATTTTAGAGCACAAGTCTTTGGCGTTCTGCTCATAATAT
TCTCTCTGTGCTAATGTGTTCATGACTCTTTCCCACTTTTTTTTCTATTA
TATCCCCCATCATTTGGTTTTATATGTTAGGACCTCACTCCACTTTGGTA
TTGTACTTTTGTCTATGGAATAATTAAAAATTTTATTACCATTCCTCCTA
CATGTTGTTCCATCTTCTTGTATCATTCCTTTCTTGCTTTCCACCGCCCC
CTTCCCCTTATGCACTGCCCTGTCCTTTTCTATTTTTATTTCCCCCCCTT

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCATTACTGGCATTCACAAGGATAGAATTTCCCCTCTCCTA
AGCATCCCACTTTTACAACATATTTCCTGTTTCCATAATCGATTCTAAAG
ACTGAGAAAATAAAGTTATAATTCTTAATTTCCAAAACATACTTTATTTT
TTCTTTACTAGTAGAGTTTTCTTTGCAACTCAAAGGTAAATTAGTCATAC
TTACGTCTGGAAGTGTGACGATTTCCATGGAGAAGTTTTTGCTAAGAAAT
TATGCGAAGACCTCTCAGTGGCAGGAAATAGTTCATATAGAAGAGAGAGT
TCTTCTCTGCCTGGTAGGAAGGAAGGCAGGCCTAAGTTAGTGCTTATTCT
TAATTCTCTTTGGCCCCCTCTCATGTCTGTTTTTCTCTTCATCATCTAAA
CTTCTTACTGTTCAGATTGGGTGGAAATTAATAACAATTCAAAGTCAGAA
GCTCTTAGGATAAAATTGCTAATGTATTCCGTGATCTAGCCTCTGCTTGT
GCTGGTCTCCTCTGGGCACCAATCTCAATTTTAAAGCAGCCATTCCAAAT
GTAGGTGAACTTTGAAGTAAAATGTATAGGGGTTAATGTAAGCACTCCTG
AGACAATGCCTCAGATATTCTGGCTCTTGTATAAAGGTATTTCATACATT
TTAAATGCACTCTCTAGGGTAATGTTTCTACCCCAN

Query= MSMg01no396_e05.g1 MSMg01no396_e05.g1 CHROMAT_FILE:
MSMg01no396_e05.g1 PHD_FILE: MSMg01no396_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:21 2005
         (556 letters)



>mm_chr9_80859575_80860530
          Length = 956

 Score = 1029 bits (532), Expect = 0.0
 Identities = 550/556 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   cattactggcattcacaaggatagaatttcccctctcctaagcatcccacttttacaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattactggcattcacaaggatagaatttcccctctcctaagcatcccacttttacaaca 260

                                                                       
Query: 61  tatttcctgtttccataatcgattctaaagactgagaaaataaagttataattcttaatt 120
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 tatttcctgtttccataatcgattctaaagactgagaaaataaagtcataattcttaatt 320

                                                                       
Query: 121 tccaaaacatactttattttttctttactagtagagttttctttgcaactcaaaggtaaa 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tccaaaacatactttattttttctttactagtagagttttctttgcaactcaaaggtaga 380

                                                                       
Query: 181 ttagtcatacttacgtctggaagtgtgacgatttccatggagaagtttttgctaagaaat 240
           ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttagtcatatttacatctggaagtgtgacgatttccatggagaagtttttgctaagaaat 440

                                                                       
Query: 241 tatgcgaagacctctcagtggcaggaaatagttcatatagaagagagagttcttctctgc 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 tatgcgaagacctctcagtggcaggaaatagttcatatagaagagagagttcctctctgc 500

                                                                       
Query: 301 ctggtaggaaggaaggcaggcctaagttagtgcttattcttaattctctttggccccctc 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggtaggaaagaaggcaggcctaagttagtgcttattcttaattctctttggccccctc 560

                                                                       
Query: 361 tcatgtctgtttttctcttcatcatctaaacttcttactgttcagattgggtggaaatta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcatgtctgtttttctcttcatcatctaaacttcttactgttcagattgggtggaaatta 620

                                                                       
Query: 421 ataacaattcaaagtcagaagctcttaggataaaattgctaatgtattccgtgatctagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataacaattcaaagtcagaagctcttaggataaaattgctaatgtattccgtgatctagc 680

                                                                       
Query: 481 ctctgcttgtgctggtctcctctgggcaccaatctcaattttaaagcagccattccaaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctctgcttgtgctggtctcctctgggcaccaatctcaattttaaagcagccattccaaat 740

                           
Query: 541 gtaggtgaactttgaa 556
           ||||||||||||||||
Sbjct: 741 gtaggtgaactttgaa 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)