Query= MSMg01no396_h19.b1 MSMg01no396_h19.b1 CHROMAT_FILE:
MSMg01no396_h19.b1 PHD_FILE: MSMg01no396_h19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:37 2005
(119 letters)
>mm_chr9_60633894_60634412
Length = 519
Score = 209 bits (108), Expect = 5e-59
Identities = 114/116 (98%)
Strand = Plus / Minus
Query: 1 aatgaataccactttatgtaaatctccactttaagtctagataaaatatatctgttataa 60
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aatgaatagtactttatgtaaatctccactttaagtctagataaaatatatctgttataa 257
Query: 61 gattaatgttgggggtgggaagctggtggagttgctaacaggcttgctgggcgagc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gattaatgttgggggtgggaagctggtggagttgctaacaggcttgctgggcgagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no396_h19.g1 MSMg01no396_h19.g1 CHROMAT_FILE:
MSMg01no396_h19.g1 PHD_FILE: MSMg01no396_h19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:37 2005
(400 letters)
>mm_chr9_60458110_60458908
Length = 799
Score = 696 bits (360), Expect = 0.0
Identities = 390/400 (97%), Gaps = 1/400 (0%)
Strand = Plus / Plus
Query: 1 ctgtcaggcaaacaaccaacacagcttctgaagcaagcccatgcgcctgtgctcaccttg 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 201 ctgtcaggcaaacaaccaacacagcttctgaagcaagcccatgcg-ctgtgctcacctcg 259
Query: 61 tgatcacatttcttaataacaatgccagcctgcatggaaagttacctatacgatgaacac 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 260 tgatcacatttcttaataacaatgccagcccgcatggaaagttacctatacgatgaacac 319
Query: 121 ttcttgttctgaacagtgagctatatatttatttcactaactgaaactctgacttgggaa 180
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 320 ttcttgttctgaatagtgagctatatatttatttcactaactaaaactctgacttgggaa 379
Query: 181 agtcatatgcctttaaacaaagcaaggaaaaaatactttcattttttactcaataattgg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 380 agtcatatgcctttaaacaaagcaagaaaaaaatactttcattttttactcaataattgg 439
Query: 241 gggaggaagggaagggactgatcagtgtttcatagttcatggtataacttggttttgaaa 300
||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 440 gggaggaagggtagggactgatcagtttttcatagttcacggtataacttggttttgaaa 499
Query: 301 atatttatacaaatatttgaaatttttaaaagtatttttatttacatgaatatatgtgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 500 atatttatacaaatatttgaaatttttaaaagtatttttatttacatgaatgtatgtgtg 559
Query: 361 ggtgcccagggaggccagaagagagcatcagattccagga 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggtgcccagggaggccagaagagagcatcagattccagga 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 799
Length adjustment: 9
Effective length of query: 391
Effective length of database: 790
Effective search space: 308890
Effective search space used: 308890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
