Query= MSMg01no397_b07.b1 MSMg01no397_b07.b1 CHROMAT_FILE:
MSMg01no397_b07.b1 PHD_FILE: MSMg01no397_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:23 2005
(470 letters)
>mm_chr9_117543043_117543911
Length = 869
Score = 884 bits (457), Expect = 0.0
Identities = 463/465 (99%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 6 gaattctctgtccttaccgcaagacaccatgttttgccacctctctccagaagtgaaagt 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctctgtccttactgcaagacaccatgttttgccacctctctccagaagtgaaagt 265
Query: 66 acttttcctaaattaaatatactctaatgaagccaccaggaaagataaacatgaaataaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acttttcctaaattaaatatactctaatgaagccaccaggaaagataaacatgaaataaa 325
Query: 126 acagtgttaaaaagagagacgttaatgggcgaattgtctaatacaccagatcccaaaatg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acagtgttaaaaagagagacgttaatgggcgaattgtctaatacaccagatcccaaaatg 385
Query: 186 tcatcttattaagtattttaaaaagagagacagagagaggattgctcttaaaaaaaaaat 245
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 386 tcatcttattaagtattttaaaaagagagacagagagaggattgctcttaaaaaaaaa-t 444
Query: 246 aaatagccccaaattgctcttgaacgtaagtgggaggaatgcttgccaggccacagcagg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaatagccccaaattgctcttgaacgtaagtgggaggaatgcttgccaggccacagcagg 504
Query: 306 aagaatggtggtaatcggaccaatatcacatagacagctaaggccgcttgagtcagaccc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagaatggtggtaatcggaccaatatcacatagacagctaaggccgcttgagtcagaccc 564
Query: 366 tgcactcactacacaggctcctcgcgacactccggggacactcctatgacagcacctatt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgcactcactacacaggctcctcgcgacactccggggacactcctatgacagcacctatt 624
Query: 426 ttcttactttctcatctattagggagagtctctcaatgctggtga 470
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttcttactttctcatctattagggagagtctctcaatgctggtga 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 869
Length adjustment: 10
Effective length of query: 460
Effective length of database: 859
Effective search space: 395140
Effective search space used: 395140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_b07.g1 MSMg01no397_b07.g1 CHROMAT_FILE:
MSMg01no397_b07.g1 PHD_FILE: MSMg01no397_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:23 2005
(389 letters)
>mm_chr9_117719797_117720589
Length = 793
Score = 717 bits (371), Expect = 0.0
Identities = 386/393 (98%), Gaps = 4/393 (1%)
Strand = Plus / Minus
Query: 1 taaagaccatctctacatgggttagcttttaaagaacaagccccacctaagccccagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 taaagaccatctctacatgggttagcttttaaagaacaagccccacctaagccccagctg 534
Query: 61 ccctctccagcccagattctccagttcatgctcctgagttgactgagcttcgaggagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ccctctccagcccagattctccagttcatgctcctgagttgactgagcttcgaggagctg 474
Query: 121 ctaatgattagaaaaatgagcagtttgtcttttccctgggcatagctgcttggttctgct 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 473 ctaatgattagaaaaatgagcagtttctcttttccctgggcatagctgcttggttctgct 414
Query: 181 gagg----gctaatgaaggggctgtagcaaagagataacacatcagcagaatcctctctg 236
|||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 413 gagggctagctaatgaaggggctgcagcaaagagataacacatcagcagaatcctctctg 354
Query: 237 agcgcttgctggggctcagaaggcacaatgatgtaagggacctggcctaacctcttgccc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agcgcttgctggggctcagaaggcacaatgatgtaagggacctggcctaacctcttgccc 294
Query: 297 tgttcactctacctccaggctaatggctaaccttgcctgacccctaagcgaggagagatg 356
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 293 tgttcactctacctccaggctaatggctaaccttgcctgacccctaagtgaggagagatg 234
Query: 357 aggatgcatgctttggtttccccccagagttga 389
|||||||||||||||||||||||||||||||||
Sbjct: 233 aggatgcatgctttggtttccccccagagttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 793
Length adjustment: 9
Effective length of query: 380
Effective length of database: 784
Effective search space: 297920
Effective search space used: 297920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
