Query= MSMg01no399_c18.b1 MSMg01no399_c18.b1 CHROMAT_FILE:
MSMg01no399_c18.b1 PHD_FILE: MSMg01no399_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:07 2005
(653 letters)
>mm_chr9_50249208_50250260
Length = 1053
Score = 1208 bits (625), Expect = 0.0
Identities = 646/653 (98%)
Strand = Plus / Plus
Query: 1 atgagtgcatttgaaggacagacagaaggaagaaagggagagggaaggaaggagagagag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgagtgcatttgaaagacagacagaaggaagaaagggagagggaaggaaggagagagag 260
Query: 61 aatatttaaaatatcctacatataactggaccccggaacttgtctagctgcagtataatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatatttaaaatatcctacatataactggaccccggaacttgtctagctgcagtataatg 320
Query: 121 accagtgtagaggtctgtctctctggtgaggctgtgagctgctcaaatgacctaacaggt 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 accagtgtagaggtctgtctctctggtgaggctgtgagctgctcacatgacctaacaggt 380
Query: 181 ggtcggcagacatgatcagctgggttttggcctctgtgtggaagacattttcataaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtcggcagacatgatcagctgggttttggcctctgtgtggaagacattttcataaaacc 440
Query: 241 ccagaccttagaggtcatctcatacaacacacagggaacctgcatccagagatcactact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagaccttagaggtcatctcatacaacacacagggaacctgcatccagagatcactact 500
Query: 301 gtgaggaaaggtagcccaggagaacacaaagactaaagccacaaagacctaccaaaagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 gtgaggaaaggtagcccaggagaacacaaagactaaagccacaaagacctaggaaaagcc 560
Query: 361 agccccctgcctgcaggcctccatcactctgaggctcttagcccgtgtcaccaaccactt 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 agccccctgcctgcaggcctccatcactctgaggctcttagcctgtgtcaccaaccactt 620
Query: 421 ggaacaaactgttcataactcagcttcctcattctttaccccaggtcggaggacaagcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaacaaactgttcataactcagcttcctcattctttaccccaggtcggaggacaagcct 680
Query: 481 cacctcggctctgcatcaggtcatggtgaccacctcctccacacactgccacaaacccag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacctcggctctgcatcaggtcatggtgaccacctcctccacacactgccacaaacccag 740
Query: 541 ccttttgtatggcacaaagagcttgctggggagctcttaatatagggctgaggagcaagc 600
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 741 ccttttgtatggcacaaagagcttgctggggagctcttaatatggggctgaggagcaagc 800
Query: 601 gaaaggaagcgcttggaaacagaggagatggtccttgttttgcctgctgcaga 653
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 801 gaaaggaagcgcttggaaacagaggagatggcccttgttttgcctgctgcaga 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_c18.g1 MSMg01no399_c18.g1 CHROMAT_FILE:
MSMg01no399_c18.g1 PHD_FILE: MSMg01no399_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:07 2005
(157 letters)
>mm_chr9_50361816_50362371
Length = 556
Score = 281 bits (145), Expect = 2e-80
Identities = 154/157 (98%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 1 acatgtgaggaatgaatgatgcagccagatttacatgtaggagatttaatattcacatta 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 acatg-gaggaatgaatgatgcagccagatttacatgtaggagatttaatattcacatta 298
Query: 61 ttgcactggtggaaaggcatcttccccgctcatccagataaattagaatctctagacctg 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ttgcactggtggaaaagcatcttccccgctcatccagataaattagaatctctagacctg 238
Query: 121 atgagagctggaggcaattgtctgaggtgtctaaccc 157
|||||||||||||||||||||||||||| ||||||||
Sbjct: 237 atgagagctggaggcaattgtctgaggtctctaaccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 556
Length adjustment: 8
Effective length of query: 149
Effective length of database: 548
Effective search space: 81652
Effective search space used: 81652
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
