Query= MSMg01no399_l21.b1 MSMg01no399_l21.b1 CHROMAT_FILE:
MSMg01no399_l21.b1 PHD_FILE: MSMg01no399_l21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:50 2005
(243 letters)
>mm_chr9_83021143_83021786
Length = 644
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%), Gaps = 1/243 (0%)
Strand = Plus / Minus
Query: 1 ggagtctttggacaatgttgactgggacttaagatcactagtgaggagcagtgctttgca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 443 ggagtctttggacaatgttgactgggacttaagatcactagtgaggagtagtgctttgca 384
Query: 61 ggtagcctgccctttaactccagtagcctaagtttttctcctcttttcctcactttactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggtagcctgccctttaactccagtagcctaagtttttctcctcttttcctcactttactg 324
Query: 121 tacttttggcatagtaggccgtgtgttcggccactatgtcttttctctggtactggaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tacttttggcatagtaggccgtgtgttcggccactatgtcttttctctggtactggaact 264
Query: 181 ac-tttttctggctcctgagcttcctcttagatatgaaggttctcaagcagccacctgtc 239
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acttttttctggctcctgagcttcctcttagatatgaaggttctcaagcagccacctgtc 204
Query: 240 tcc 242
|||
Sbjct: 203 tcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 644
Length adjustment: 9
Effective length of query: 234
Effective length of database: 635
Effective search space: 148590
Effective search space used: 148590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no399_l21.g1 MSMg01no399_l21.g1 CHROMAT_FILE:
MSMg01no399_l21.g1 PHD_FILE: MSMg01no399_l21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:50 2005
(244 letters)
>mm_chr9_82850214_82850857
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Plus
Query: 1 cagtgaaaccatggtttgaggtctttacagagaaagggatgaaataatgttaagatttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtgaaaccatggtttgaggtctttacagagaaagggatgaaataatgttaagatttgc 260
Query: 61 tttaagaaagtttactgtagctttcttgcatggctgcaatggtaatgaaactggcaatga 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaagaaaatttactgtagctttcttgcatggctgcaatggtaatgaaactggcaatga 320
Query: 121 tctaactaaaagcaaagctactttagagaaataaatcccactactccaacactaaacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctaactaaaagcaaagctactttagagaaataaatcccactactccaacactaaacttg 380
Query: 181 aggttaggaagttaggaactatggcttagctgatggaattcgtgtgctttctgcacagca 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 aggttaggaagttaggaactatggcttagctggtggaattcgtgtgctttctgcacagca 440
Query: 241 ctga 244
||||
Sbjct: 441 ctga 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
