Query= MSMg01no400_e14.b1 MSMg01no400_e14.b1 CHROMAT_FILE:
MSMg01no400_e14.b1 PHD_FILE: MSMg01no400_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:32 2005
(503 letters)
>mm_chr9_73483472_73484374
Length = 903
Score = 530 bits (274), Expect = e-155
Identities = 292/298 (97%), Gaps = 2/298 (0%)
Strand = Plus / Minus
Query: 207 ctttctttc-tttctttctttctttctttctttctttctttctgtttgttttttggtttt 265
||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 899 ctttc-ttcttttctttctttctttctttctttctttctttctgtttggtttttggtttt 841
Query: 266 tgagacaggttttctctgtatagccatggctgtcctggaactcactttgtagaccaggct 325
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tgagacagggtttctctgtatagccatggctgtcctggaactcactttgtagaccaggct 781
Query: 326 aacctcgaactcataaatccgcctgcgtctgcctcccaagtgctgggattaaaggcatgc 385
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 780 gacctcgaactcataaatccgcctgcgtctgcctcccaagtgctaggattaaaggcatgc 721
Query: 386 accaccaccgcccagctggaactatttctaattaggatataaatgttgttgtgtctgctg 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 accaccaccgcccagctggaactatttctaattaggatataaatgttgttgtgtctgctg 661
Query: 446 ggagttttgaagtcttaaaatctgtttactcctaaagacataaaaacttcttctgcaa 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ggagttttgaagtcttaaaatctgtttactcctaaagacataaaaacttcttctgcaa 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_e14.g1 MSMg01no400_e14.g1 CHROMAT_FILE:
MSMg01no400_e14.g1 PHD_FILE: MSMg01no400_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:33 2005
(248 letters)
>mm_chr9_73305246_73305893
Length = 648
Score = 439 bits (227), Expect = e-128
Identities = 242/247 (97%)
Strand = Plus / Plus
Query: 1 catctttgggggcctgatgtgaggttggtgtttaatgtgtgtatctaagtggttctgccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catctttgggggcctgatgtgaggttggtgtttaatgtgtgtatctaagtggttctgccc 260
Query: 61 accattggcccatcgctgcttctcctatgagtcagttcaataagctgtgagtctctttct 120
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 261 accattggcccatcgctgcttctcctatgagtcagtccaaaaagctgtgagtctctttct 320
Query: 121 gaagattctcctctagtcgtcccagggtttaggctttatcttgacctaacatgaggtccc 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 gaagattctcctctagtcgtcccagggtttaggctctatcttgacctaacatgaggtccc 380
Query: 181 cagtgaaattccaaattggaggggtgtgctgtttcaatagtataagaaagcaagccagac 240
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 cagggaaattccaaattggaggggtgtgttgtttcaatagtataagaaagcaagccagac 440
Query: 241 agagcca 247
|||||||
Sbjct: 441 agagcca 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
