Query= MSMg01no400_j04.b1 MSMg01no400_j04.b1 CHROMAT_FILE:
MSMg01no400_j04.b1 PHD_FILE: MSMg01no400_j04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:55 2005
(544 letters)
>mm_chr9_101026594_101027537
Length = 944
Score = 946 bits (489), Expect = 0.0
Identities = 525/537 (97%)
Strand = Plus / Plus
Query: 7 gaattcagagctctttacctctcatacatcagatgtagatagcatatttgtagttccaac 66
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcagagctccgtaactctcatacatcagatgtagatagcatatttgtagttccaac 266
Query: 67 aaagtctaagaaaaaaattataaggaatttctcaagaagtcatagaaagtaatggaaaaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaagtctaagaaaaaaattataaggaatttctcaagaagtcatagaaagtaatggaaaaa 326
Query: 127 accgataaatgatacagttgcggaaatgtcccaagtagtacaatttttggagagctttct 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 accgataaatgatacagttgcggaaatgtcccaagtagtacaatttttggagagctttct 386
Query: 187 ttcttagcatgatccatacatggaactttgataaaggttcatttaacacatgatccattt 246
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttcttagcatgatctatacatggaactttgataaaggttcatttaacacatgatccattt 446
Query: 247 atcatttaggggaggttcaagtctgtagcaggggtgattgactattatagagttgtgctc 306
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 447 atcatttaggggaggttcaagtctgtagcaggggtgattgactattacagagttgtgctc 506
Query: 307 cgtgatcttggattccatgaaaggtgtgacttgttaaaggcaatggggcatgagaatgtc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cgtgatcttggattccatgaaaggtgtgacttgttaaaggcaatggggcatgagaatgtc 566
Query: 367 aggcagtcagtgaggactgtaagagaagactattgggaccatgtcatccaaggtaagaga 426
|||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 567 aggcagtcagtgaggattgtaagagaagactactggggccatgtcatccaaggtaagaga 626
Query: 427 gctaagctggagacatcgcttttatattatttaaagaggaaaaaatagagaaggattttt 486
||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 627 gctaagccggatacatcgctttaatattatttaaagaggaaaaaatagagaaggattttt 686
Query: 487 taatggtagttgtagtatttctgacatgggcagccctgctagagccctgacagaatc 543
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 taatggtagttatagtatttctgacatgggcagccctgctagagccctgacagaatc 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_j04.g1 MSMg01no400_j04.g1 CHROMAT_FILE:
MSMg01no400_j04.g1 PHD_FILE: MSMg01no400_j04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:55 2005
(414 letters)
>mm_chr9_101200542_101201355
Length = 814
Score = 286 bits (148), Expect = 1e-81
Identities = 186/210 (88%), Gaps = 18/210 (8%)
Strand = Plus / Minus
Query: 1 ttcatggggaaggactatgcaaggaacagcagataggagaggctctggagccagcttgga 60
|||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||
Sbjct: 336 ttcatggggaaggactatgctatgaacagcagataggagaggctctgaagccagcttgga 277
Query: 61 gtatcagagcaagctttgaagaagagaccagatctgtccaagtctaggggacaaataggg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gtattagagcaagctttgaagaagagaccagatctgtccaagtctaggggacaaataggg 217
Query: 121 gacacacgcacacaca------------------ttctcattcccctaatccccactgaa 162
||||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 216 gacacacacacacacacacacacacacacacacattctcattcccctaatccccgctgaa 157
Query: 163 gtggagaataatccatattgcctactgtgg 192
||||||||||||||||||||||||||||||
Sbjct: 156 gtggagaataatccatattgcctactgtgg 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
