Query= MSMg01no402_j08.b1 MSMg01no402_j08.b1 CHROMAT_FILE:
MSMg01no402_j08.b1 PHD_FILE: MSMg01no402_j08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:31 2005
(189 letters)
>mm_chr9_84641684_84642273
Length = 590
Score = 360 bits (186), Expect = e-104
Identities = 189/190 (99%), Gaps = 1/190 (0%)
Strand = Plus / Plus
Query: 1 taagtatttaagaaaatagaattaaccatgaaaaccaatttgtgtgtgtgtttattt-gt 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 taagtatttaagaaaatagaattaaccatgaaaaccaatttgtgtgtgtgtttattttgt 260
Query: 60 tttatatgtcattttttgatattaaatacttgcccacatggctttcagagtgcattgttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttatatgtcattttttgatattaaatacttgcccacatggctttcagagtgcattgttt 320
Query: 120 cttcaagagtgaatttggacagactgcctttgtgggaacagattctttttgtcttatttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcaagagtgaatttggacagactgcctttgtgggaacagattctttttgtcttatttc 380
Query: 180 ttaaataagt 189
||||||||||
Sbjct: 381 ttaaataagt 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 590
Length adjustment: 8
Effective length of query: 181
Effective length of database: 582
Effective search space: 105342
Effective search space used: 105342
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_j08.g1 MSMg01no402_j08.g1 CHROMAT_FILE:
MSMg01no402_j08.g1 PHD_FILE: MSMg01no402_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:32 2005
(398 letters)
>mm_chr9_84832282_84833079
Length = 798
Score = 598 bits (309), Expect = e-175
Identities = 312/313 (99%)
Strand = Plus / Minus
Query: 1 tcttcccattcacatcacatgtcaactgtaattgacattgcacagttcttgttagatgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tcttcccattcacatcacatgtcaactgtaattgacattgcacagttcttgttagatgac 254
Query: 61 caaacttcaagattcatggatgaacaacttctcatatataaaagacaatctcatggtctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 caaacttcaagattcatggatgaacaacttctcatatataaaagacaatctcatggtctt 194
Query: 121 gttgctcttagaatcttcatgtcccatttttttcacattgctctttgagtattatgtata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gttgctcttagaatcttcatgtcccatttttttcacattgctctttgagtattatgtata 134
Query: 181 tggttgcacggtagacatatcagctagaattgggcacattttggccacattttgacccga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tggttgcacggtagacatatcagctagaattgggcacattttggccacattttgacccga 74
Query: 241 tataattttttggaaggttttcattgctgcaaaaagtagtttcttcaataagaggtgaga 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tataagtttttggaaggttttcattgctgcaaaaagtagtttcttcaataagaggtgaga 14
Query: 301 gctaccattgact 313
|||||||||||||
Sbjct: 13 gctaccattgact 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
