Query= MSMg01no408_h02.b1 MSMg01no408_h02.b1 CHROMAT_FILE:
MSMg01no408_h02.b1 PHD_FILE: MSMg01no408_h02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:25 2005
(530 letters)
>mm_chr9_4227309_4228238
Length = 930
Score = 973 bits (503), Expect = 0.0
Identities = 518/523 (99%)
Strand = Plus / Minus
Query: 8 gaattctaaattacccacatctgctctgaagtacagaagaaaaaaactcagagttatatt 67
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gaattctaaattacagacatctgctctgaagtacagaagaaaaaaactcagagttatatt 671
Query: 68 tgtcactaaataactttctgtgttgcataaacatgcaacatcaggttctttccctggcta 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tgtcactaaataactttctgtgttgcataaacatgcaacatcaggttctttccctggcta 611
Query: 128 gtctgctttcttgcctttgtgtcactatttcaatactgtgctccactctttcctcaagtc 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ctctgctttcttgcctttgtgtcactatttcaatactgtgctccactctttcctcaagtc 551
Query: 188 aacatttcttgttaatacactttaaccatcagaagcattgagagatttataacctcctct 247
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gacatttcttgttcatacactttaaccatcagaagcattgagagatttataacctcctct 491
Query: 248 gaaacaaaatctaacaaaagccaagggtaaaatggagactcccagggcatccagtaggag 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gaaacaaaatctaacaaaagccaagggtaaaatggagactcccagggcatccagtaggag 431
Query: 308 ccagtagcaccatcctaccaaccttcccaaggaaaaagtaaattaccttttaagatcaat 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ccagtagcaccatcctaccaaccttcccaaggaaaaagtaaattaccttttaagatcaat 371
Query: 368 gacacaaggaaatcaatcaatttttagtaaacatgtcatcatttcttagattatacaaca 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gacacaaggaaatcaatcaatttttagtaaacatgtcatcatttcttagattatacaaca 311
Query: 428 agaaaaataaaaatagaccatcacaaaacaaaagatattgcagcctaatttgactgtaag 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agaaaaataaaaatagaccatcacaaaacaaaagatattgcagcctaatttgactgtaag 251
Query: 488 catacttccatctgtgtgcatagtgtgtgtgcacatacttgga 530
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 catacttccatctgtgtgcatagtgtgtgtgcacatacttgga 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_h02.g1 MSMg01no408_h02.g1 CHROMAT_FILE:
MSMg01no408_h02.g1 PHD_FILE: MSMg01no408_h02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:25 2005
(382 letters)
>mm_chr9_4425484_4426265
Length = 782
Score = 719 bits (372), Expect = 0.0
Identities = 379/382 (99%), Gaps = 3/382 (0%)
Strand = Plus / Minus
Query: 1 tttacagagcaaggcagaaacacataggctgagtctgcgaagtaaagttacatgtttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tttacagagcaaggcagaaacacataggctgagtctgcgaagtaaagttacatgtttatt 716
Query: 61 atcattggaaaaaaatgttatcaatggttcatcatacatatagaatgtatttaagagagg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 atcattgg-aaaaaatgttatcaatggttcatcatacatatagaatgtatttaagagagg 657
Query: 121 ccagatgatacacacatttaattccaacattcaggaagctcctacgccataaataaagat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ccagatgatacacacatttaattccaacattcaggaagctcctacgccataaataaaga- 598
Query: 181 tttttttttttttttacttttttggaagtttttggatatcacattctataaaggaatcaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 -ttttttttttttttacttttttggaagtttttggatatcacattctataaaggaatcaa 539
Query: 241 attggtagttattctgagacattgaaatatgtgactgactaaaatttggaaagtttctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 attggtagttattctgagacattgaaatatgtgactgactaaaatttggaaagtttctat 479
Query: 301 taattctaaggaacaaagtcagattaaaatgccatttttcagaacttacacatgtttagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 taattctaaggaacaaagtcagattaaaatgccatttttcagaacttacacatgtttagt 419
Query: 361 cattacagtctgcctttgaaca 382
||||||||||||||||||||||
Sbjct: 418 cattacagtctgcctttgaaca 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
