Query= MSMg01no408_p06.b1 MSMg01no408_p06.b1 CHROMAT_FILE:
MSMg01no408_p06.b1 PHD_FILE: MSMg01no408_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:07 2005
(375 letters)
>mm_chr9_73919394_73920168
Length = 775
Score = 656 bits (339), Expect = 0.0
Identities = 363/371 (97%)
Strand = Plus / Plus
Query: 5 gaattcatttcttttaactattaaggaatagtaatggaccccaaccctccagatccacaa 64
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 205 gaattcatttcttttaactattaaggaatagtaatgggccccaaccctccagatctacaa 264
Query: 65 gctctgaatccagaactccagtctcatgcttactttatatcagagataccatggccagca 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctctgaatccagaactccactctcatgcttactttatatcagagataccatggccagca 324
Query: 125 caacctataaaagacaatctttaatttggggctcaaggttccagaaggttagggtccatg 184
||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 325 caacctataaaagacaatccttaatttggggctcaagtttccagaaggttaggatccatg 384
Query: 185 accatcatgttagggagcttggctgaaggcaggcaggcatggtgctagagcagtagctga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 accatcatgttagggagcttggctgaaggcaggcaggcatggtgctagagcagtagctga 444
Query: 245 gaacttacatcttgatccacagtcatgaagcagttagtttggattggcgtggacttttga 304
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 445 gaacttatatcttgatccacagtcatgaagcagttagtttggattggtgtggacttttga 504
Query: 305 agcctcacagctgcctccaatgagatacctcctccaacaaggccacacctcctaatcctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agcctcacagctgcctccaatgagatacctcctccaacaaggccacacctcctaatcctt 564
Query: 365 cccaaattgat 375
|||||||||||
Sbjct: 565 cccaaattgat 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_p06.g1 MSMg01no408_p06.g1 CHROMAT_FILE:
MSMg01no408_p06.g1 PHD_FILE: MSMg01no408_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:07 2005
(364 letters)
>mm_chr9_74069184_74069951
Length = 768
Score = 615 bits (318), Expect = e-180
Identities = 354/368 (96%), Gaps = 5/368 (1%)
Strand = Plus / Minus
Query: 1 attagctctcatagttttggtggagtctttgaaaacagaggtaacttcactttctctcat 60
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 718 attagctctcatagttttggtggagtctttgagaacagaggtaacttc-ctttctctcat 660
Query: 61 gtttgcaagttttctttctcttgcttgataactcttggtaaaattcctagaccataaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gtttgcaagttttctttctcttgcttgataactcttggtaaaattcctagaccataaaga 600
Query: 121 ggaaaagtgataggagtaaatatctcgtcttcctcatctattatgatgctggttatgggt 180
|||| || |||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 599 ggaatagcgataagagtaaatatctcgtcttcctcatctattatgatgctggttatgagt 540
Query: 181 gtggggcgagcagtgagttctggatggttctctttgtcatcacacatcacagagggttta 240
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 539 gtggggtgagcagtgagttctgggtggttctctttgtcatcacacatcacagagggttta 480
Query: 241 tttctttggttggtttggtttcgttttctccacaacataatggtatgaaaatatatctg- 299
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 479 tttctttggttggtttggtttggttttctccacagcataatggtatgaaaatatatctgt 420
Query: 300 ---aatagattctcattaaatggtttagagtatacaaagaattctgaatacactaaactg 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ctgaatagattctcattaaatggtttagagtatacaaagaattctgaatacactaaactg 360
Query: 357 tactagtg 364
||||||||
Sbjct: 359 tactagtg 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 768
Length adjustment: 9
Effective length of query: 355
Effective length of database: 759
Effective search space: 269445
Effective search space used: 269445
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
