Query= MSMg01no409_h02.b1 MSMg01no409_h02.b1 CHROMAT_FILE:
MSMg01no409_h02.b1 PHD_FILE: MSMg01no409_h02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:48 2005
(365 letters)
>mm_chr9_35266676_35267440
Length = 765
Score = 561 bits (290), Expect = e-164
Identities = 341/358 (95%), Gaps = 2/358 (0%)
Strand = Plus / Minus
Query: 9 ttcctgccctcactgctttgatgaactgttaacacggaactaggggagatatcaaccctt 68
||||||||||||||||||||||||||||||||||||||||| ||||||| |||| || ||
Sbjct: 688 ttcctgccctcactgctttgatgaactgttaacacggaactgggggagaaatcagccgtt 629
Query: 69 gcctccccaacttgcttttgctcaccgtgtttcttcgcagcaatagtaacagaaactaag 128
||||||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 628 tcctccccgacttgcttttgcttaccgtgtttctttgcagcaatagtaacagtaactaag 569
Query: 129 acattgatctgtcgcattttcatcgccattcagcttaaaaatactttaagctttcactat 188
|||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||
Sbjct: 568 acattgatctgtcgcattttcatcgccattcagctt-aaagtactttaagctatcactat 510
Query: 189 gacttgaagtgtaatttaatgtttgcaaatgcatgataa-ttttctttaaagtgtttgtt 247
|||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 509 gacttgaagtgtaatttaatgtttccaaatgcatgataatttttctttaaaatgtttgtt 450
Query: 248 tttattattaacttctaaatttgtcatactaagatcaaagaggtattgtctcacacagat 307
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 449 tttattattaacttctaaatttgtcatactaagatcaaagaggtgttgtctcacacggat 390
Query: 308 gctctgaactttgaaatatttaaaacttgcaccacaaataagttccctattataaatc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gctctgaactttgaaatatttaaaacttgcaccacaaataagttccctattataaatc 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_h02.g1 MSMg01no409_h02.g1 CHROMAT_FILE:
MSMg01no409_h02.g1 PHD_FILE: MSMg01no409_h02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:48 2005
(151 letters)
>mm_chr9_35075329_35075879
Length = 551
Score = 284 bits (147), Expect = 1e-81
Identities = 150/151 (99%)
Strand = Plus / Plus
Query: 1 cgtcctgggagattgttcactcccggctcctggtcgttttgttccagcgctacttcctct 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgtcccgggagattgttcactcccggctcctggtcgttttgttccagcgctacttcctct 260
Query: 61 aggcccctgaatgctcagagattggcagagaagctccgagcccagaaacaagagcaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggcccctgaatgctcagagattggcagagaagctccgagcccagaaacaagagcaaaag 320
Query: 121 gcaaaggaagtgcgggtgagtctagagagac 151
|||||||||||||||||||||||||||||||
Sbjct: 321 gcaaaggaagtgcgggtgagtctagagagac 351
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 551
Length adjustment: 8
Effective length of query: 143
Effective length of database: 543
Effective search space: 77649
Effective search space used: 77649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
