Query= MSMg01no411_c15.b1 MSMg01no411_c15.b1 CHROMAT_FILE:
MSMg01no411_c15.b1 PHD_FILE: MSMg01no411_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:07 2005
(244 letters)
>mm_chr9_69784208_69784851
Length = 644
Score = 443 bits (229), Expect = e-129
Identities = 241/245 (98%), Gaps = 2/245 (0%)
Strand = Plus / Minus
Query: 1 ctaaggagccccaagtttgagtctccagttcagactgtctctgagctgcaggtacccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ctaaggagccccaagtttgagtctccagttcagactgtctctgagctgcaggtacccagc 513
Query: 61 tcacacc-ccaactcggctgttccaaggacaccacaaattcagcgcgtccaagatgcaaa 119
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tcacacctcc-actcggctgttccaaggacaccacaaattcagcgcgtccaagatgcaaa 454
Query: 120 cctgatcttgtattgtctcccaactcgttagtgccagaattcaaaataccagtaagctgg 179
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 453 cctgatcttgtattgtctcccaactcactagtgccagaattcaaaataccagtaagctgg 394
Query: 180 gaacttcagactcattcacaagcctccctttctctgtagcttttgtagtcaatattcctt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gaacttcagactcattcacaagcctccctttctctgtagcttttgtagtcaatattcctt 334
Query: 240 ccaaa 244
|||||
Sbjct: 333 ccaaa 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no411_c15.g1 MSMg01no411_c15.g1 CHROMAT_FILE:
MSMg01no411_c15.g1 PHD_FILE: MSMg01no411_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:07 2005
(327 letters)
>mm_chr9_69621867_69622593
Length = 727
Score = 540 bits (279), Expect = e-158
Identities = 309/327 (94%), Gaps = 13/327 (3%)
Strand = Plus / Plus
Query: 1 ttcataggctaaaggctttcaggagacctcaggaggtgggcatcttgctaggcctctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcataggctaaaggctttcaggagacctcaggaggtgggcatcttgctaggcctctttc 260
Query: 61 tgctcttccccctcttatttttctcttctctttcttctataaacatttctgagggccgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctcttccccctcttatttttctcttctctttcttctataaacatttctgagggccgac 320
Query: 121 tcatctctgccattaagtagcaaacttgtgctctgataaagtcatttcagaattttaaat 180
||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 321 tcatctctgccattaagtagcaaacttgt-------------catttcagaatattaaat 367
Query: 181 ctcaattggtaaaagaaaatacccaagacatcagcaccagctccttagactgcagggttt 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 368 ctcaattggtaaaagaaaatacccaagacatcagcatcagctccttagactgcagggttt 427
Query: 241 catgtttttaagctttgagataaaaaagaaaagatatatttgccttcgctccctcaccct 300
||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 428 catgtggttaagctttgagataaaaaagaaaagatatatttgccttcgctccctcgccct 487
Query: 301 ctccccctttgtgtgtgtgtgtgtgtg 327
|||||||||||||||||||||||||||
Sbjct: 488 ctccccctttgtgtgtgtgtgtgtgtg 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
