Query= MSMg01no411_e10.b1 MSMg01no411_e10.b1 CHROMAT_FILE:
MSMg01no411_e10.b1 PHD_FILE: MSMg01no411_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:16 2005
(576 letters)
>mm_chr9_10276465_10277440
Length = 976
Score = 1060 bits (548), Expect = 0.0
Identities = 569/580 (98%), Gaps = 8/580 (1%)
Strand = Plus / Plus
Query: 1 tcgcattgagcaatttcctgaaaaatcgtgccatactttaacttttttccctttttattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcgcattgagcaatttcctgaaaaatcgtgccatactttaacttttttccctttttattt 260
Query: 61 tgaaatatattttcaaaactttaaagatgtaaaatagattcttttcataccatatactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaaatatattttcaaaactttaaagatgtaaaatagattcttttcataccatatactct 320
Query: 121 gattatattttctaatccccgagctccacccagctcctcctcatcttccctcccacacaa 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattatattttctaatccctgagctccacccagctcctcctcatcttccctcccacacaa 380
Query: 181 atccacattctttctttctctccttagaaaacaaatcagcatctaaatattagtgaggga 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 atccacattctttctttctctcattagaaaacaaatcagcatctaaatattagtgaggga 440
Query: 241 ataatttttt----ataaaaacaaacaagatggaataggatgaaacaaacagacagaagc 296
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataatt----gaaaataaaaacaaacaagatggaataggatgaaacaaacagacagaagc 496
Query: 297 aaaggagccaaataaaaagcacaagaaacatataaacacagacacaaaagatgcattgaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aaaggagccaaataaaaagcacaagaaacatataaacacagacacaaaagatgcattgaa 556
Query: 357 tactgaatggtattttaggaatatgtgtatggttattccaagacaattaaagaactcatt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tactgaatggtattttaggaatatgtgtatggttattccaagacaattaaagaactcatt 616
Query: 417 ttctacagtttttaaaaatgatgtgaagggtgtattttaatgaagtaattattatttgtg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttctacagtttttaaaaatgatgtgaagggtgtattttaatgaagtaattattatttgtg 676
Query: 477 gtcttctttggtgaattttacatatcagaaaattaaacatgaaaatatatcagatttttt 536
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gtcttctttggtgaatttcacatatcagaaaattaaacatgaaaatatatcagatttttt 736
Query: 537 tcatcctttaatttctttacaactgagatgtatgaaatac 576
||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tcatcctttaatttctttacaactgagatgtatgaaatac 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_e10.g1 MSMg01no411_e10.g1 CHROMAT_FILE:
MSMg01no411_e10.g1 PHD_FILE: MSMg01no411_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:16 2005
(288 letters)
>mm_chr9_10444058_10444747
Length = 690
Score = 484 bits (250), Expect = e-141
Identities = 278/288 (96%), Gaps = 4/288 (1%)
Strand = Plus / Minus
Query: 1 aattccctggctcttgatatggtcatcaatgatgattattttagagaaactgctatttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aattccctggctcttgatatggtcatcaatgatgattattttagagaaactgctatttaa 428
Query: 61 gcaattttatgtgatcatataggcctttccataatgcagaaagtcattgtatttagctaa 120
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 427 acaattttatgtgatcatatatgcctttccatagtgcagaaagtcattgtatttagctaa 368
Query: 121 ggatattttgcttaagcaaatatcccccaaatgcaatgtaaaagtcaggtgattggtgtt 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gaatattttgcttaagcaaatatcccccaaatgcaatgtaaaagtcaggtgattggtgtt 308
Query: 181 tagttatgaaatattgatggacgattccttcagcaaattgtttatt-aatgacagtttgt 239
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 307 tagttatgaaatattgatggacgattccttcagcaaattgtttattaaatgacattttgt 248
Query: 240 atgtccct--catatgaacatctaatgtgtatttgcttttagagaatg 285
|||| ||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 247 atgt-cctggcatatgaacatctaatttgtatttgcttttagagaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 690
Length adjustment: 9
Effective length of query: 279
Effective length of database: 681
Effective search space: 189999
Effective search space used: 189999
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
