Query= MSMg01no413_e02.b1 MSMg01no413_e02.b1 CHROMAT_FILE:
MSMg01no413_e02.b1 PHD_FILE: MSMg01no413_e02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:53 2005
(599 letters)
>mm_chr9_123698658_123699654
Length = 997
Score = 1114 bits (576), Expect = 0.0
Identities = 591/596 (99%), Gaps = 2/596 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcaaacatgacatctggaactgaaaatctccatatggttttggaggtagaaat 63
|||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 797 ggaattctcaaacagga-atctggaactgaaaatttccatatggttttggaggtagaaat 739
Query: 64 gaagagccatatataaacaaagatgttatttctgaacaatttcaattgccccccgccccc 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 738 gaagagccatatataaacaaagatgttatttctgaacaatttcaattgcccccc-ccccc 680
Query: 124 aggtaatcaaaccactcctggcccaaaaagaaggaaattgtgtagatatggtttgatgat 183
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 679 aggtaatcaaaccactcctggcccaaaaagaaggaaatcgtgtagatatggtttgatgat 620
Query: 184 catagggttttgtttttaaactcaaactcagtggttcaacctgtgagaattctttaaact 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 catagggttttgtttttaaactcaaactcagtggttcaacctgtgagaattctttaaact 560
Query: 244 gagaaaaaaacattcttggctcacaggttttggaaaaggaggcagagaggagagacatct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gagaaaaaaacattcttggctcacaggttttggaaaaggaggcagagaggagagacatct 500
Query: 304 ttgactcctcagaaccagggagtgcaatacaaagactattgagtgctgctcacatttaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttgactcctcagaaccagggagtgcaatacaaagactattgagtgctgctcacatttaca 440
Query: 364 aaaacgaacactacttggtagaatcttagcacactttccttgtctcatttcatttcttct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aaaacgaacactacttggtagaatcttagcacactttccttgtctcatttcatttcttct 380
Query: 424 gaggaaacaggaaagttaattcataatttccttttccctctcaagcactttttaaatttc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaggaaacaggaaagttaattcataatttccttttccctctcaagcactttttaaatttc 320
Query: 484 cagagacctctgatcaagggtcatttttagagccttttgatgtgtgtttaatctcactca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cagagacctctgatcaagggtcatttttagagccttttgatgtgtgtttaatctcactca 260
Query: 544 atgttcttttggtgactgcagtgatactgagcctccgtgggaaggcttaacagtta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atgttcttttggtgactgcagtgatactgagcctccgtgggaaggcttaacagtta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 997
Length adjustment: 10
Effective length of query: 589
Effective length of database: 987
Effective search space: 581343
Effective search space used: 581343
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_e02.g1 MSMg01no413_e02.g1 CHROMAT_FILE:
MSMg01no413_e02.g1 PHD_FILE: MSMg01no413_e02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:53 2005
(242 letters)
>mm_chr9_123515543_123516184
Length = 642
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%)
Strand = Plus / Plus
Query: 1 ttcctttggtatgttgttggtgctatatttaagatgaacagcatttgttctatcttccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcctttggtatgttgttggtgctatatttaagatgaacagcatttgttctatcttccca 260
Query: 61 gaaagatcatacaacatcagtttttcatcatcattattagagtgggatggaggggggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaagatcatacaacatcagtttttcatcatcattattagagtgggatggaggggggaca 320
Query: 121 ggaagaagtgattgtggaagtgacagcagagtcagaaggacacaggacaataacatcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaagaagtgattgtggaagtgacagcagagtcagaaggacacaggacaataacatcacc 380
Query: 181 atggccatcactgcagcagtcacagggaagctaaagatttccaagagaagagtaggagta 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acggccatcactgcagcagtcacagggaagctaaagatttccaagagaagagtaggagta 440
Query: 241 gg 242
||
Sbjct: 441 gg 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
