Query= MSMg01no413_h01.b1 MSMg01no413_h01.b1 CHROMAT_FILE:
MSMg01no413_h01.b1 PHD_FILE: MSMg01no413_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:07 2005
(576 letters)
>mm_chr9_72284889_72285855
Length = 967
Score = 971 bits (502), Expect = 0.0
Identities = 550/572 (96%), Gaps = 13/572 (2%)
Strand = Plus / Minus
Query: 7 attcttggacttaccatgcagctaacaatcccttggaactctactaagaatgtggtttgt 66
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 attcttggacttaggatgcagctaacaatcccttggaactctactaagaatgtggtttg- 604
Query: 67 gtatatgtaactttaaattttagctaatacattaaaaccaaaaattgtgtcttgtggaat 126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 -----tgtaactttaaattttagctaatacattaaaaccaaaaattgtgtcttgtggaat 549
Query: 127 atcatggaacatcctggtgcattgtataatatttaaatcagtaaacaccaaaatatttct 186
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 548 atcatggaacatcctggtgcattgtataatatttaaatcagtaaacatcaaaatatttct 489
Query: 187 ttagggttaaacagtcttttcctctgttttttt--tttttttttgtaatgtacagcatat 244
||||||||||||| |||||||||||| | | |||||||||||||||||||||||||
Sbjct: 488 ttagggttaaacaatcttttcctctg----tgtggtttttttttgtaatgtacagcatat 433
Query: 245 taccatcctacacccccacctggctgtgcacccctgtacttctgactatattttgctaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 taccatcctacacccccacctggctgtgcacccctgtacttctgactatattttgctaac 373
Query: 305 tgcagtctagcccttcgccatttccccctgccctagcccctgtcatcaccaatctgctta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgcagtctagcccttcgccatttccccctgccctagcccctgtcatcaccaatctgctta 313
Query: 365 cagtttctgtgaaatcaacatcgttaaagactctacgtgttctcacaatcatactttatc 424
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 312 cagtttctgtgaaatcaacattgttaaagactctacgtgttttcacaatcatactttatc 253
Query: 425 ttttttttcttaagaactttttgagatttaactttacgtaaataaagtgtctatgcgcca 484
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttttttt-cttaagaactttttgagatttaactttacgtaaataaagtgtctatgcgcca 194
Query: 485 ttatgtgcctggtgcccacaaagaccagaagatgttatcatctcccctagaactggagtt 544
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 193 ttatgtgcctgatgcccacaaagaccagaagatgttatcagctcccctagaactggagtt 134
Query: 545 agaaattcctggaggtaggttactggagctgt 576
||||||||||||||||||||||||||||||||
Sbjct: 133 agaaattcctggaggtaggttactggagctgt 102
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 967
Length adjustment: 10
Effective length of query: 566
Effective length of database: 957
Effective search space: 541662
Effective search space used: 541662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_h01.g1 MSMg01no413_h01.g1 CHROMAT_FILE:
MSMg01no413_h01.g1 PHD_FILE: MSMg01no413_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:07 2005
(430 letters)
>mm_chr9_72179767_72180596
Length = 830
Score = 832 bits (430), Expect = 0.0
Identities = 430/430 (100%)
Strand = Plus / Plus
Query: 1 tctgcagctcgttattggcagttgtgaattgcctatttgaatgctgagaactggagcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgcagctcgttattggcagttgtgaattgcctatttgaatgctgagaactggagcctg 260
Query: 61 ggtcctctgaagagaaacaagcaccatggatttttattttatatttttatttcagtagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtcctctgaagagaaacaagcaccatggatttttattttatatttttatttcagtagtc 320
Query: 121 aaagttgtcctcatttcagtgaccctgatagattgcttttcagaatgatgctctcgtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagttgtcctcatttcagtgaccctgatagattgcttttcagaatgatgctctcgtggg 380
Query: 181 ttttttgtttgtttgttttttgttttatttttgtttttctaaatagaattcatgtatatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttttgtttgtttgttttttgttttatttttgtttttctaaatagaattcatgtatatc 440
Query: 241 taagtttcttttaggtcataggtcatatcttggctttcatgttgctttttgattattgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taagtttcttttaggtcataggtcatatcttggctttcatgttgctttttgattattgtc 500
Query: 301 agatactgctttcaaaggtcatcccacctttttaggtggcttcagtactttccccaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agatactgctttcaaaggtcatcccacctttttaggtggcttcagtactttccccaattt 560
Query: 361 cctgtctttgatcatcaacctggtctcctggttccagcatttacatcaatgtttaattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctgtctttgatcatcaacctggtctcctggttccagcatttacatcaatgtttaattct 620
Query: 421 tctctcttag 430
||||||||||
Sbjct: 621 tctctcttag 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
