Query= MSMg01no414_g24.b1 MSMg01no414_g24.b1 CHROMAT_FILE:
MSMg01no414_g24.b1 PHD_FILE: MSMg01no414_g24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:28 2005
(484 letters)
>mm_chr9_4087267_4088150
Length = 884
Score = 859 bits (444), Expect = 0.0
Identities = 471/480 (98%)
Strand = Plus / Minus
Query: 5 gaattcatctgccttttcagtactatacagaatcagcttcttaccgtctaaaaattcttc 64
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 684 gaattcatctgccttttcagtactatacagaatcagcttcttaccatctaaaaattcttc 625
Query: 65 ccagacattttattgaaattgtattaaatatacaaaaattaggaaattatgtcaaatgtt 124
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcagacaatttattgaaattgtattaaatatacaaaaattaggaaattatgtcaaatgtt 565
Query: 125 ttaactcaagaaactgaattcagggacatggagtaagttggagggaggggataggcaaag 184
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttaactcaagaaactgaattcggggacatggagtaagttggagggaggggataggcaaag 505
Query: 185 agtatgtcaagataagaagctagtggtccttgtgggatatctagggaaaatatatccaac 244
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 504 agtatgtcaagataagaagctagtggcccttgtgggatatctagggaaaatatatccaac 445
Query: 245 agagttgaaaatatggcactgtttataccagtgtcccctcttgatcttacactaagggat 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 444 agagttgaaaatatggcactgtttataccagtgtcccctcttgatcttacactaagggct 385
Query: 305 gctccatccataaaagacatttatcttcaaagcacattttgtcttaggagtctatttaga 364
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 384 gctccatccataaaagacatttatcttaaaagcacattttgtcttaggagtctatttaga 325
Query: 365 atggtgtagggacttgcaaatatattatggtggaatatttcttctatcaattgtgtggta 424
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 324 atggtgtagggacttgcaagtatattatggtggaatatttcttttatcaattgtgtggta 265
Query: 425 gcactttacatatagccagttaagaccattgttgctgctcattatgtgcctagcctctga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcactttacatatagccagttaagaccattgttgctgctcattatgtgcctagcctctga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_g24.g1 MSMg01no414_g24.g1 CHROMAT_FILE:
MSMg01no414_g24.g1 PHD_FILE: MSMg01no414_g24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:29 2005
(396 letters)
>mm_chr9_3911428_3912222
Length = 795
Score = 727 bits (376), Expect = 0.0
Identities = 392/398 (98%), Gaps = 3/398 (0%)
Strand = Plus / Plus
Query: 1 aagaaaatattgtgacaatatttaatatttttattaaacagaaagacatattagaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaaaatattgtgacaatatttaatatttttattaaacagaaagacatattagaaggat 260
Query: 61 gtgatttccttctctagagtaaactatctccctgaactatcagtctacattttttcacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgatttccttctctagagtaaactatctccctgaactatcagtctacattttttcacag 320
Query: 121 agagattatcagttgagacatttgaaaacattcaagcctgagataatgtctattatttgt 180
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 321 agagattatcagttgagacatttggaaacattcaagcctgagatactgtctattatttgt 380
Query: 181 aagtgtgtgatgaatttttacatttcttatagaaatccaagtggttcaaccacatggtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtgtgtgatgaatttttacatttcttatagaaatccaagtggttcaaccacatggtat 440
Query: 241 tcttaatgggctttgttgtttggttgtttggattttttctttttttttagagatttcata 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 tcttaatgggctttgttgtttggttgtttggattttttctttttttt-agagatttcata 499
Query: 301 tacattatgtttctttgctaggtaaaatgaacagcagtgactagaatatgattccaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tacattatgtttctttgctaggtaaaatgaacagcagtgactagaatatgattccaaatt 559
Query: 361 atcagtgttctgcttttctttaaaaaaaaa--tacaac 396
|||||||||||||||| ||||||||||||| ||||||
Sbjct: 560 atcagtgttctgctttactttaaaaaaaaaaatacaac 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 795
Length adjustment: 9
Effective length of query: 387
Effective length of database: 786
Effective search space: 304182
Effective search space used: 304182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
