Query= MSMg01no415_a20.b1 MSMg01no415_a20.b1 CHROMAT_FILE:
MSMg01no415_a20.b1 PHD_FILE: MSMg01no415_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:19 2005
(510 letters)
>mm_chr9_95766856_95767765
Length = 910
Score = 957 bits (495), Expect = 0.0
Identities = 501/503 (99%)
Strand = Plus / Plus
Query: 5 gaattcaatgccaagctcaacaggagaatctcagtggtaataatgatgaggtgtcaccaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatgccaagctcaacaggagaatctcagtggtaataatgatgaggtgtcaccaa 264
Query: 65 agaggcgtaaactcagctcctctctcagctcttacaaaaagccatccagacagcctgaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agaggcgtaaactcagctcctctctcagctcttacaaaaagccatccagacagcctgaag 324
Query: 125 agtatgacctcatctgattttattgtagacagttcataaaattttatcttaaaaaataaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtatgacctcatctgattttattgtagacagttcataaaattttatcttaaaaaataaa 384
Query: 185 gtttcattaactattctgatttaagaacataaggaacatcttttgctagtcattatgatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtttcattaactattctgatttaagaacataaggaacatcttttgctagtcattatgatg 444
Query: 245 tactctagtatgacactatagatgtagatgtagttgctttgaatgttttttcatgcctgt 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 tactctagtatgacactatagatgtagatgtagttgctttgaatgtttttgcatgcctgt 504
Query: 305 ttaatttgggtttttaatatttggaaagtgtcaacctgtatgtctattacaagttcaaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttaatttgggtttttaatatttggaaagtgtcaacctgtatgtctattacaagttcaaat 564
Query: 365 cttaattaatatattatttttgtatgtagtcaaagaattgccatagttcagccaaactga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttaattaatatattatttttgtatgtagtcaaagaattgccatagttcagccaaactga 624
Query: 425 acagttttaaatctatcccaatgtagataaaaagttcatagtatattgcaatttttgttt 484
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 625 acagttttaaatctatcccaatgtagataaaaagttgatagtatattgcaatttttgttt 684
Query: 485 tattttactactataattactgg 507
|||||||||||||||||||||||
Sbjct: 685 tattttactactataattactgg 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space: 450000
Effective search space used: 450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_a20.g1 MSMg01no415_a20.g1 CHROMAT_FILE:
MSMg01no415_a20.g1 PHD_FILE: MSMg01no415_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:19 2005
(443 letters)
>mm_chr9_95917785_95918630
Length = 846
Score = 557 bits (288), Expect = e-163
Identities = 311/320 (97%), Gaps = 4/320 (1%)
Strand = Plus / Minus
Query: 1 cataaagccaaacaaagattgtaatattaagaatacctaaagttttgcacctgcaggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cataaagccaaacaaagattgtaatattaagaatacctaaagttttgcacctgcaggagt 261
Query: 61 gaaatacatattgataagatgaatatagcctaatttcttaaatc---ttattttaggtgg 117
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 260 gaaatacatattgataagatgaatatagcctaatttcttaaatcttgttattttaggtgg 201
Query: 118 tattattattattattatcatcatcattgtatgtggagttggctctctcctttacattta 177
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 200 tattattattattattatcatcatcattatatgtggagttggctctctcctttacattta 141
Query: 178 tgtatagagatcaaacgcagatcattgggtggcaattctttttacctgctaagccatctt 237
||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tgtatggagaccaaactcagatcattgggtggcaattctttttacctgctaagccatctt 81
Query: 238 gctgtccttaa-tttttttctgaaatagggtctcactatgtagaaatggttgtcctagaa 296
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 80 gctgtccttaattttttttctgaaatagggtctcactatgtagaaatggttgtcctggaa 21
Query: 297 cttgtcatgtaaaccaggct 316
||||||||||||||||||||
Sbjct: 20 cttgtcatgtaaaccaggct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 846
Length adjustment: 10
Effective length of query: 433
Effective length of database: 836
Effective search space: 361988
Effective search space used: 361988
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
