XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATAGT
TTTTTCCAGCTGAGTAGTACTCCATTATGTAATTGCACCACATTTTCTGT
ATCCATTCCTCTGTTGAAGAACATCTGGGTTCCTTCCAGCTTCTGGCTAT
TATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTATTACATA
TTGGAGCATCTTCTGGGTATATGCCCAGGAGTGGTATAGCTGGGTCCTCA
GGTAGTACTATGTCCAATTTTCTGAGGAACCACCAAACTGATTTCCAGAG
TGGTTGTACCATCTTCTAATCCCATCAGCAATGGAGGAGTGTTCCTCTTT
CTCCACATCCTCGCCAGCATCTGCTGTCACCTGAGTTTTTGATCTTAGAC
ATTCTGACTGGTGTGAGATGGAATCTCAGGGTTGTTTTGATTTGCCTTTC
CCTGGGCATTTTCTTTACTAAGGATTGATGTGGGAGAATCCAGCTCACTA
GGGATGGTGGCACCCTTAGGCTGGTGATCCTAAGTGGTATAAGAAAGAAG
GAGGAGCCGGGAGGTGGTGGCACATGCCTTTAATCCCAGCACTTANGAGG
CAGAGGCAGGTGGATTTCTGAGTTCGAGACCAGCCTGGTCTACAGAGTGA
ATTCCAGGATAGCCCGAGATACACAGAGAAACCCTGTCTCAAATACCTTC
CTAAATATATTATTTCCANCTTCAATTGACGG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAATAGTTGCATCTGTCAGTGGTCCAAA
AAGGCCTCAGGATAGGGTTGCTGTAACAGATATGAAAAGTGATTTTCAGG
CTTGCTTAAATGAAAAGGTAAGTTATATTATTGTTACTGTTATGCTATGT
GCTAAGTAGTTAAGAGCCTCAGGGTTTGGGATTGATTTCTAAATTCAGTC
TACTGCTCTTTTCTTTTTTTCTTCATATGCTATGGTGTATGCTAGCAGCC
TCAAGAGGGTCAGAGTTTGGATTATATCTATTTAAAGTAATCAGAAGTTA
ATAAAGTGAGGTTTCTCAGTCACAGTGGTTTCCTTTCAAGTGCTAATCAG
GTGCGTGATAGAACAGAACTCGTTTATATCACTGAAGAATGTTTTACTGG
GCATCATTACTACAGACTTCTTACTAGGAAGAAACCATTGCACTGCATAA
TTATTTTCATTGAATTTGAAAAAAAAAAACCAACACAAACAAAATAACTT
TGGCTCTGGGGTTTCTGATTTTGCCTTTAAAGTCATGGCTGTAGTTTTGT
CACTTTGGTCTGTTAGGAAACAGTAAAGTTGGCTTTGCCTGCCCATCCTT
ACTTTTATAGTTTCCTTACTTTTTATTTGGAAAAAACTAAACATGTTTCA
AAAGAAGGTGGCCTCTGAATAATTGGTGTACACTTGCCACGCAC

Query= MSMg01no416_b20.g1 MSMg01no416_b20.g1 CHROMAT_FILE:
MSMg01no416_b20.g1 PHD_FILE: MSMg01no416_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:40 2005
         (538 letters)



>mm_chr9_54743009_54743947
          Length = 939

 Score = 1011 bits (523), Expect = 0.0
 Identities = 535/539 (99%), Gaps = 1/539 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatagttgcatctgtcagtggtccaaaaaggcctcaggatagggttgctgtaacagatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagttgcatctgtcagtggtccaaaaaggcctcaggatagggttgctgtaacagatat 260

                                                                       
Query: 61  gaaaagtgattttcaggcttgcttaaatgaaaaggtaagttatattattgttactgttat 120
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 gaaaagtgattttcaggcttgcttaaatgaaaaggtaagttattttattgttactgttat 320

                                                                       
Query: 121 gctatgtgctaagtagttaagagcctcagggtttgggattgatttctaaattcagtctac 180
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 gctatgtgctaagtagttaagagcctcagagtttgggattgatttctaaattcagtctac 380

                                                                       
Query: 181 tgctcttttctttttttcttcatatgctatggtgtatgctagcagcctcaagagggtcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctcttttctttttttcttcatatgctatggtgtatgctagcagcctcaagagggtcag 440

                                                                       
Query: 241 agtttggattatatctatttaaagtaatcagaagttaataaagtgaggtttctcagtcac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtttggattatatctatttaaagtaatcagaagttaataaagtgaggtttctcagtcac 500

                                                                       
Query: 301 agtggtttcctttcaagtgctaatcaggtgcgtgatagaacagaactcgtttatatcact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtggtttcctttcaagtgctaatcaggtgcgtgatagaacagaactcgtttatatcact 560

                                                                       
Query: 361 gaagaatgttttactgggcatcattactacagacttcttactaggaagaaaccattgcac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaagaatgttttactgggcatcattactacagacttcttactaggaagaaaccattgcac 620

                                                                       
Query: 421 tgcataattattttcattgaatttgaaaaaaaaaaa-ccaacacaaacaaaataactttg 479
           ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 621 tgcgtaattattttcattgaatttgaaaaaaaaaaaaccaacacaaacaaaataactttg 680

                                                                      
Query: 480 gctctggggtttctgattttgcctttaaagtcatggctgtagttttgtcactttggtct 538
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gctctggggtttctgattttgcctttaaagtcatggctgtagttttgtcactttggtct 739


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 939
Length adjustment: 10
Effective length of query: 528
Effective length of database: 929
Effective search space:   490512
Effective search space used:   490512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)