Query= MSMg01no416_p17.b1 MSMg01no416_p17.b1 CHROMAT_FILE:
MSMg01no416_p17.b1 PHD_FILE: MSMg01no416_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:43 2005
(629 letters)
>mm_chr9_92896756_92897785
Length = 1030
Score = 1187 bits (614), Expect = 0.0
Identities = 623/626 (99%), Gaps = 1/626 (0%)
Strand = Plus / Minus
Query: 5 gaattcctcctctgtac-atataattgggtatagctacagttttgagcaaatgactaaca 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gaattcctcctctggacaatataattgggtatagctacagttttgagcaaatgactaaca 771
Query: 64 agccaaagttgttattcctgcaaacatacatctgttgatataatggaggactcctattta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 agccaaagttgttattcctgcaaacatacatctgttgatataatggaggactcctattta 711
Query: 124 atgccttaacagttgtttggagacagacttacagtttagtataattggctatcactttca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 atgccttaacagttgtttggagacagacttacagtttagtataattggctatcactttca 651
Query: 184 ctatgatttttagacttttttattccatctcaagaccccttctacaagaaggctctacac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ctatgatttttagacttttttattccatctcaagaccccttctacaagaaggctctacac 591
Query: 244 tcttgaaagctcgtttgatgtccatatttacatatgtgacacagtgcttcttaggggcct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tcttgaaagctcgtttgatgtccatatttacatatgtgacacagtgcttcttaggggcct 531
Query: 304 gaattaattcaaagcccagatcaaaatagtacctggttttgagtagaatttgttttggtg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gaattaattcaaagcccagatcaaaatagtacctggttttgagtagaatttgttttggtg 471
Query: 364 gtgtatgactaatagaaatatagattggatcaactgtatcttcttcaataacaatgttct 423
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 470 gtgtatgactaatagaaatataaattggatcaactgtatcttcttcaataacaatgttct 411
Query: 424 gttaagtatagccacaatgctatcagaaggctgctgaacaactcagtctccccagtgata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gttaagtatagccacaatgctatcagaaggctgctgaacaactcagtctccccagtgata 351
Query: 484 tggcttgggagaatagactagaattggacataagtttggctaaaaacatgtagattttat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tggcttgggagaatagactagaattggacataagtttggctaaaaacatgtagattttat 291
Query: 544 atgatgttggaaggacagtattctaccctcatccttaatgattcaactccagataggacc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atgatgttggaaggacagtattctaccctcatccttaatgattcaactccagataggacc 231
Query: 604 tttaccaaagtcacagggctctcttt 629
||||||||||||||||||||||||||
Sbjct: 230 tttaccaaagtcacagggctctcttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1030
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1020
Effective search space: 631380
Effective search space used: 631380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_p17.g1 MSMg01no416_p17.g1 CHROMAT_FILE:
MSMg01no416_p17.g1 PHD_FILE: MSMg01no416_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:43 2005
(585 letters)
>mm_chr9_92838517_92839501
Length = 985
Score = 1100 bits (569), Expect = 0.0
Identities = 581/585 (99%)
Strand = Plus / Plus
Query: 1 tttccaaaggtaaagggaattcttggcaaatcttctgtttcttattgaattatgacaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttccaaaggtaaagggaattcttggcaaatcttctgtttcttattgaattatgacaagt 260
Query: 61 tgagaaacgaatatttatggagaatagtctgtaagatctgttagcagaatcaggcaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagaaacgaatatttatggagaatagtctgtaagatctgttagcagaatcaggcaagat 320
Query: 121 atcaaattttgagtagaaactcagactaaataatatcacaagacctcagcagggaacaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaaattttgagtagaaactcagactaaataatatcacaagacctcagcagggaacaaa 380
Query: 181 agaaaaagccacccttagtgtgggacactgcatcttcctgtcagctgtgtagaggagaaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 agaaaaagccacccttagtgtgggacactgcatcttcctgtcagctgtgtagaggaaaaa 440
Query: 241 atatggcagtggttctccattggaatgacaattttaagagaaacaattagttatgcaaat 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 atatggcagtggttctccattggaatggcaattttaagagaaacaattagttatgcaaat 500
Query: 301 attagttcaatatagaaaatgggatttgtggctttaaaattccatttgccacttcaatta 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attagttcaatatagaaaatgagatttgtggctttaaaattccatttgccacttcaatta 560
Query: 361 caaataaagatttacccttctattcattttcttacttttaattccatcttcattttttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaataaagatttacccttctattcattttcttacttttaattccatcttcattttttct 620
Query: 421 tcaactttattagttgtcttagattgtttatatcatgcttatttctttcccccaaatcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcaactttattagttgtcttagattgtttatatcatgcttatttctttcccccaaatcac 680
Query: 481 agaataattttaaaacaattattctgcttttctatcttatatcttgaccagagtcttccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaataattttaaaacaattattctgcttttctatcttatatcttgaccagagtcttccc 740
Query: 541 tccctctactcctcctagtccactctccatacacttctctgtttt 585
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tccctctactcctcctagtccactctccatacacttctctgtttt 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
