GGGGGTGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCAACATCATTCAATACAAAAGTCCAAACATTATCGCAG
AATCTGTATGTATTTAGAGAGCCCTTTAAAACAAAACATTGAGAAATGCC
ATGAGAAGCCATTGTTTCCCCTCATGCTTTATTTCAAAGCAACTCAAGAA
TGCTCAGCTACCAAGTATATATAGCCGCTAAAAGCAGTGTGCTTAGTGCT
TAGCTTAATTTATTTAATTACTTACTTAATTTCATCTACTTAGAAACAAG
CAAGAGAAAACCTGGATAAGTCAGCTTAGGGAAGAGTTTAAAAACATTTT
AGCTAGCTGACTATTTTTAGTACTCTAAAACAATGTACAAATTACTTACC
TGAGATGAAAAGGTGTATGAAAGCTTGAATTTGTGTGTCTACTGCCCTCT
TGTGGATAAATTATGAAAATTCCATTTGAGTTCTCTCTTCTGAGAAAGGA
TCTCTCTACACAGCCCTGGCTAACCTGGAACTCACTATTGTCCTGGAAAC
TGTCTACTTCTTTCTCCCAAGTGTTAGGATTAAAGGTGTGCATCATTACA
TTCTGCCCATTTGATTAGAATTAAATATATATATTTATTTATATACACAC
ACACACATCTGCACATGTCTATGTGCCTGGTGCATGCTTACCTGAGTTTA
TATGTACTACATTTGTACAGATGCCTC

NTTTCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTGTGGGGCGGGGGGCA
GGAGAATTGCTAATCTTGTTATGGTTATTTCTCTGAGAACAGCTAACATT
GTTTTGGCAACAATATTAGGCTCAGTCATTTTGACCGCTAAAACTATGTT
TTTACATTTGTTTAGTCAGCCAGCTTCCTTATCTGGCTCTGCACTTGCCC
TGATAATACAGTTTGGAAAGTCCTTTTCGAAGGGGGAAGGTACTGAGTGG
TCTTGAATTCATTTTGGATATTACAGCACCAGCATTCTTCCTGACTGCAG
ATACAATGTGACCAGCCACCTCCTGTTTCTGCCACCATAATGATGGGATT
CCCAGTACTATCAAATATCTGTTGAATAAACAGTTGAATGACTTGATGCT
TGGAACACAGTGTTTTACCATGGAATCTAACTCACACCATGAATGCAGGT
CAGCACTTCTGACCACACAGGTGTTTGTAGAAACACCTCATGGAGGAGGA
CTTGAATTTGAATGCAGTTATCATCTCAAGACTTGTGAGTAGAAGGCCAG
CTCAAGATGGAGCCCAGAAAGGCTGCCTAGCAGAAGCCCTTATGATTTTG
TCTGGAGAATAGTGGAGGTTAAGAGGATCATAGATGAATAATGGAAGAAG
AGAGNATGCAGCATTTTTCACCCATGAGTCTCT

Query= MSMg01no417_e03.b1 MSMg01no417_e03.b1 CHROMAT_FILE:
MSMg01no417_e03.b1 PHD_FILE: MSMg01no417_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:05 2005
         (674 letters)



>mm_chr9_69866630_69867703
          Length = 1074

 Score = 1195 bits (618), Expect = 0.0
 Identities = 628/632 (99%), Gaps = 2/632 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaacatcattcaatacaaaagtccaaacattatcgcagaatctgtatgtatttag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gaattcaacatcattcaatacaaaagtccaaacattatcgcagaatctgtatgtatttag 573

                                                                       
Query: 65  agagccctttaaaacaaaacattgagaaatgccatgagaagccattgtttcccctcatgc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agagccctttaaaacaaaacattgagaaatgccatgagaagccattgtttcccctcatgc 513

                                                                       
Query: 125 tttatttcaaagcaactcaagaatgctcagctaccaagtatatatagccgctaaaagcag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tttatttcaaagcaactcaagaatgctcagctaccaagtatatatagccgctaaaagcag 453

                                                                       
Query: 185 tgtgcttagtgcttagcttaatttatttaattacttacttaatttcatctacttagaaac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgtgcttagtgcttagcttaatttatttaattacttacttaatttcatctacttagaaac 393

                                                                       
Query: 245 aagcaagagaaaacctggataagtcagcttagggaagagtttaaaaacattttagctagc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aagcaagagaaaacctggataagtcagcttagggaagagtttaaaaacattttagctagc 333

                                                                       
Query: 305 tgactatttttagtactctaaaacaatgtacaaattacttacctgagatgaaaaggtgta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgactatttttagtactctaaaacaatgtacaaattacttacctgagatgaaaaggtgta 273

                                                                       
Query: 365 tgaaagcttgaatttgtgtgtctactgccctcttgtggataaattatgaaaattccattt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tgaaagcttgaatttgtgtgtctactgccctcttgtggataaattatgaaaattccattt 213

                                                                       
Query: 425 gagttctctcttctgagaaaggatctctctacacagccctggctaacctggaactcacta 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gagttctctcttctgagaaaggatctctctacacagccctggctaacctggaactcacta 153

                                                                       
Query: 485 ttgtcctggaaactgtctacttctttctcccaagtgttaggattaaaggtgtgcatcatt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ttgtcctggaaactgtctacttctttctcccaagtgttaggattaaaggtgtgcatcatt 93

                                                                       
Query: 545 acattctgcccatttgattagaattaa--atatatatatttatttatatacacacacaca 602
           |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 92  acattctgcccatttgattagaattaaatatatatatatttatttatatacacacacaca 33

                                           
Query: 603 catctgcacatgtctatgtgcctggtgcatgc 634
           ||||||||||||||||||||  ||||||||||
Sbjct: 32  catctgcacatgtctatgtgtttggtgcatgc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space:   706496
Effective search space used:   706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)