Query= MSMg01no418_j17.b1 MSMg01no418_j17.b1 CHROMAT_FILE:
MSMg01no418_j17.b1 PHD_FILE: MSMg01no418_j17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:51 2005
(246 letters)
>mm_chr9_107945197_107945840
Length = 644
Score = 445 bits (230), Expect = e-129
Identities = 243/250 (97%), Gaps = 6/250 (2%)
Strand = Plus / Minus
Query: 1 tggtctatataattttccataatatgtatacaagatacccactgatctctatttttttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tggtctatataattttccataatatgtatacaagatacccactgatctctatttttttaa 253
Query: 61 ttttggagtaggcatgttatggtgtatgtgtggcgtatatacttgttgtagtgggtgtgt 120
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 252 ttttggagtaggcatgttatggtgtatgtgtggtgtata--cttgttgtagtgggtgtgt 195
Query: 121 ggatacacatatgtgaagggcagaggacatcatcaggtgactcttctccattggactcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggatacacatatgtgaagggcagaggacatcatcaggtgactcttctccattggactcta 135
Query: 181 t----attttttgagacagtgagcttcaggaacctgtctctttgtctctacactctcagt 236
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tctttattttttgagacagtgagcttcaggaacctgtctctttgtctctacactctcagt 75
Query: 237 gctgtagtta 246
||||||||||
Sbjct: 74 gctgtagtta 65
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 644
Length adjustment: 9
Effective length of query: 237
Effective length of database: 635
Effective search space: 150495
Effective search space used: 150495
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no418_j17.g1 MSMg01no418_j17.g1 CHROMAT_FILE:
MSMg01no418_j17.g1 PHD_FILE: MSMg01no418_j17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:51 2005
(210 letters)
>mm_chr9_107767794_107768403
Length = 610
Score = 406 bits (210), Expect = e-118
Identities = 210/210 (100%)
Strand = Plus / Plus
Query: 1 gcaagtacctaacacaagactcagatttcaagcccaaaaacaaaaaaggatgggagtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcaagtacctaacacaagactcagatttcaagcccaaaaacaaaaaaggatgggagtgat 260
Query: 61 caattaagatctggagaaatcagaactcactaatctcagatacaagctgtagacaaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caattaagatctggagaaatcagaactcactaatctcagatacaagctgtagacaaaaag 320
Query: 121 ggacaaaagatttatcaaacctttaccaactagataaggaaaatcaagataggaaaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggacaaaagatttatcaaacctttaccaactagataaggaaaatcaagataggaaaactg 380
Query: 181 aaagctcttaagaaatgtagtttaagctgg 210
||||||||||||||||||||||||||||||
Sbjct: 381 aaagctcttaagaaatgtagtttaagctgg 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
