Query= MSMg01no418_p17.b1 MSMg01no418_p17.b1 CHROMAT_FILE:
MSMg01no418_p17.b1 PHD_FILE: MSMg01no418_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:20 2005
(632 letters)
>mm_chr9_116316721_116317752
Length = 1032
Score = 1131 bits (585), Expect = 0.0
Identities = 618/629 (98%), Gaps = 1/629 (0%)
Strand = Plus / Plus
Query: 5 gaattccttcctatatca-aaatattgggtgtagctgtcactaaaataagcaatggctac 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccttcctatatgacaaatattgggtgtagctgtcactaaaataagcaatggctac 263
Query: 64 cagagactgtcacgttgacttcttctgaactttgatttattcattaaatgcttattgtag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagagactgtcacgttgacttcttctgaactttgatttattcattaaatgcttattgtag 323
Query: 124 tcttaatacatgccaagtctggttttgtttattttgcttttttaaaaaaattttaaaacc 183
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 324 tcttaatacatgccaagtctggttttgtttattttgcttttttaaaaaaaatttaaaacc 383
Query: 184 aatgaagagagtgaactatttggcatctgtcaagttgctttgctccttcaagaggctatt 243
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatgaagagcgtgaactatttggcatctgtcaagttgctttgctccttcaagaggctatt 443
Query: 244 attggactctggtacgtgataattttaaagcacatatgacctatttttgtctgcttttat 303
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 444 attggactctggtacgtgataattttaaagcacaaatgacctatttttgtctgcttttat 503
Query: 304 ttctccttgttcaagtggcaccattaattgaattgggatacaaggtcaaagtgggatttt 363
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 504 ttctccttgttcaagtggcaccattaattgagttgggatacaaggtcaaaatgggatttt 563
Query: 364 taaaggtttaagtaaataaaggttaaacagaggaagccacaaacaaaaccttttctctaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taaaggtttaagtaaataaaggttaaacagaggaagccacaaacaaaaccttttctctaa 623
Query: 424 atatccctgtgacatgaagcaatgtaccagagcaccgaatacaccaaggctttgtagagt 483
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atatccctgtgacatgaatcaatgtaccagagcaccgaatacaccaaggctttgtagagt 683
Query: 484 ttctatccagcatagcctgccagaacactgagttcccacaaagggtaggggtggattctg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 684 ttctatccagcatagcctgccagaacactgagttcccacaaagggtaggggtggactctg 743
Query: 544 caaagagcagtgtgttctagtttcatttctgttgttgtgataagatagcctaacagaaag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 caaagagcagtgtgttctagtttcatttctgttgttgtgataagatagcctaacagaaag 803
Query: 604 cagcttaaggtaaggagggttcatatggg 632
||||||| |||||||| ||||||||||||
Sbjct: 804 cagcttagggtaaggacggttcatatggg 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_p17.g1 MSMg01no418_p17.g1 CHROMAT_FILE:
MSMg01no418_p17.g1 PHD_FILE: MSMg01no418_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:20 2005
(250 letters)
>mm_chr9_116499756_116500405
Length = 650
Score = 468 bits (242), Expect = e-136
Identities = 248/250 (99%)
Strand = Plus / Minus
Query: 1 cttagcataatctgcccttaattttcagatcttcctattatattttctgtgacaagagca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 450 cttagcataatctgcccttaattttcagatcttcctattacattttctgtgacaagagca 391
Query: 61 accagaaaggtattcctgcctagtgctgactgtcaggatgtgctgaacagagctgctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 accagaaaggtattcctgcctagtgctgactgtcaggatgtgctgaacagagctgctctc 331
Query: 121 agactataaaactctttaccattctttcagtattgtgaagtgacataatgttgaatcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agactataaaactctttaccattctttcagtattgtgaagtgacataatgttgaatcacc 271
Query: 181 aagtgtatcgggtagtcttccctacaagaaaatcagaggctctgtgcagacaaagatgga 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 270 aagtgtatcgggtagtcttccctacaaggaaatcagaggctctgtgcagacaaagatgga 211
Query: 241 aggtgcacaa 250
||||||||||
Sbjct: 210 aggtgcacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
