Query= MSMg01no420_p23.b1 MSMg01no420_p23.b1 CHROMAT_FILE:
MSMg01no420_p23.b1 PHD_FILE: MSMg01no420_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:00 2005
(237 letters)
>mm_chr9_33532417_33533053
Length = 637
Score = 451 bits (233), Expect = e-131
Identities = 236/237 (99%)
Strand = Plus / Plus
Query: 1 ttgcaggtagggagttaggggatgcctgaggggtaatacgggaaccctgggctggtccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 ttgcaggtagggagttaggggatgcctgaggggtaatacgggaaccctgggctggtctca 260
Query: 61 gaacatgttgttagctccaattctaatgggactggggaagagcaaggttatgagaaccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaacatgttgttagctccaattctaatgggactggggaagagcaaggttatgagaaccta 320
Query: 121 gaggagaaagggccagggcagcaggatgcctgggagcagggtcaccttctttggaggtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggagaaagggccagggcagcaggatgcctgggagcagggtcaccttctttggaggtga 380
Query: 181 ctctaatgaaaggcactagaggagtgaattcttcttccttccatctccagttggacc 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctaatgaaaggcactagaggagtgaattcttcttccttccatctccagttggacc 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no420_p23.g1 MSMg01no420_p23.g1 CHROMAT_FILE:
MSMg01no420_p23.g1 PHD_FILE: MSMg01no420_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:00 2005
(398 letters)
>mm_chr9_33681354_33682151
Length = 798
Score = 762 bits (394), Expect = 0.0
Identities = 397/398 (99%), Gaps = 1/398 (0%)
Strand = Plus / Minus
Query: 1 caggacagccagagctatacagagaaactctgtctcaaaaaccaaaaagaaaaaaaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 647 caggacagccagagctatacagagaaactctgtctcaaaaaccaaaaag-aaaaaaaaag 589
Query: 61 agtgaggcctaaaaagaagacagattaaagtctcatgagacagccaagtttatttagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 agtgaggcctaaaaagaagacagattaaagtctcatgagacagccaagtttatttagagc 529
Query: 121 atcaaacaatttatactctgagggtgaagaagcacacaattaaagtgggcaatctaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 atcaaacaatttatactctgagggtgaagaagcacacaattaaagtgggcaatctaaagg 469
Query: 181 acaagttgtacatggcaaaatcatgcttttgcatagaggcatatgaataacaacagctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 acaagttgtacatggcaaaatcatgcttttgcatagaggcatatgaataacaacagctga 409
Query: 241 agtaaactcactcttatccactatatctgggagaatcatgaaaacacattccaaaaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agtaaactcactcttatccactatatctgggagaatcatgaaaacacattccaaaaaata 349
Query: 301 cccatgttatagaggaacagagattgcaaaactcttgtttacttgtttacttggatattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 cccatgttatagaggaacagagattgcaaaactcttgtttacttgtttacttggatattt 289
Query: 361 atcacaaggtctcagttatctcctcccacagcttcatt 398
||||||||||||||||||||||||||||||||||||||
Sbjct: 288 atcacaaggtctcagttatctcctcccacagcttcatt 251
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
