XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGAATCCGCGGAATTCAT
ATATGTATCCCTCCTGTTGTGCTAGAAGGCTTTATTTATTTAATATCCTC
CCTCTCCTATAGCTCTTAGAGTCTTTTTACATCCTCCTTTGCAAGGTTCC
GTGAGCCCTAAGGAGAGGGATTTGATGGACACATGCCATTTAGGTCTGAA
CGTCCTTAGATCTCTAGTCTGCACAATATCTAGGTTGGCCTTAGTATTTG
TTTCCATTTGCTGCAGAAGGAACCTTCTCTGATGATGGCTAAGCAAGCCA
CTGTTTTTTAGGTATAATATAATTATATTAGGAGTCATTTTATTGCTATG
TTCTTTAGCAGCATAGTATTTGTTTTCCGCTAAGTCTCTGGCCTATATAG
TCCCAGATTCTTGGCCAATGAGCAACATTGGGTTTGGGTTCCTTCTCGTG
GAGTGGGCCTTAAATCCAATCAGATACTGGTTAGTTACTCCCATAACCTT
TGTGTCCCTGTTGAACTATTACATCTTGCAGACAGAACACCATAGTGGAT
CGAAGAGTTTGTAGTTGGGTTGGTGTTGACCTTTCTCTTTTAGTGGTGCA
TGGAGTACCTTCTCTTACCATGAGCACTACTTCATAGGAGGCTCGCAGTG
GGCATTAGCTTGACTTCTCTATGTTCCATGAGCCCTGTAGATATCTTCTG
GGATGGAATCATAGGCTAACTCTCAT

CTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTTGGGGATTGGATTCGGGTCCTCAAGTCTGAA
AACATGCAAGTTTCAGATTAAGCCCTAACCCAAATCAAACCCCATTGCTG
CCTAGTTTCATCCATGTCTGCTCTAATACTCGTATCTATCTCAATCTCAC
TGCTAGGTTTCTTTTAATTTATAGAATAGAACCAGTAAATCCTTGTGGTT
GCTTATTTCTCTTTTGGAGATGAAACTCAGGGCTTTCTCACACATGATAG
GCATGCTGACCTCCATGCCTAGCCATACATCTTCAGTGGTCAAGTCTGTA
GATGTCAATAAAGCCCTTTCTTATAGCACTCTCATTTAACCTTTCCTCCT
ATGGCCAAGCCTTGGTAGCTTTAGGATTTCTTTGAATCCCTGTTCTAGCG
AGGATATGGGAAGGAAATAGAACCACCCAGATCTACCCCCATGGTCATAA
CAACACAGGCAAGAGATTTAAAAAAAAAAACCAGAATGTTGCATAAAGCA
TATTCTAGAATTACTTTTGGATTTCAGTGACCTGTGCTTTCTCTGACACC
TGCCATTGGATCAAAATGAAACAGGTATTTGTACAGAATCTATTATAGTG
GAGTATTAGCACTTTGTGCGGCCCATAAAACAAAGGGACGGACACTTTAT
TTCCCTTCTGTCCGGGGCCCTTAAAAAAAAATAAG

Query= MSMg01no422_k23.g1 MSMg01no422_k23.g1 CHROMAT_FILE:
MSMg01no422_k23.g1 PHD_FILE: MSMg01no422_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:11 2005
         (503 letters)



>mm_chr9_6422880_6423779
          Length = 900

 Score =  930 bits (481), Expect = 0.0
 Identities = 497/503 (98%), Gaps = 3/503 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttggggattggattcgggtcctcaagtctgaaaacatgcaagtttcagattaagcccta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tttggggattggattcgggtcctcaagtctgaaaacatgcaagtttcagattaagcccta 641

                                                                       
Query: 61  acccaaatcaaaccccattgctgcctagtttcatccatgtctgctctaatactcgtatct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 acccaaatcaaaccccattgctgcctagtttcatccatgtctgctctaatactcgtatct 581

                                                                       
Query: 121 atctcaatctcactgctaggtttcttttaatttatagaatagaaccagtaaatccttgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 atctcaatctcactgctaggtttcttttaatttatagaatagaaccagtaaatccttgtg 521

                                                                       
Query: 181 gttgcttatttctcttttggagatgaaactcagggctttctcacacatgataggcatgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gttgcttatttctcttttggagatgaaactcagggctttctcacacatgataggcatgct 461

                                                                       
Query: 241 gacctccatgcctagccatacatcttcagtggtcaagtctgtagatgtcaataaagccct 300
           |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 460 gacctccatgcctagctatacatcttcagtggtcaagtttgtagatgtcaataaagccct 401

                                                                       
Query: 301 ttcttatagcactctcatttaacctttcctcctatggccaagccttggtagctttaggat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ttcttatagcactctcatttaacctttcctcctatggccaagccttggtagctttaggat 341

                                                                       
Query: 361 ttctttgaatccctgttctagcgaggatatgggaaggaaatagaaccacccagatctacc 420
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttctttgaatccctgttctagtgaggatatgggaaggaaatagaaccacccagatctacc 281

                                                                       
Query: 421 cccatggtcataacaacacaggcaagagatttaaaaaaaaaaaccagaatgttgcataaa 480
           |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||
Sbjct: 280 cccatggtcataacaacacaggcaagagatt--aaaaaaaaaac-agaatgttgcataaa 224

                                  
Query: 481 gcatattctagaattacttttgg 503
           |||||||||||||||||||||||
Sbjct: 223 gcatattctagaattacttttgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 900
Length adjustment: 10
Effective length of query: 493
Effective length of database: 890
Effective search space:   438770
Effective search space used:   438770
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)