Query= MSMg01no423_h23.b1 MSMg01no423_h23.b1 CHROMAT_FILE:
MSMg01no423_h23.b1 PHD_FILE: MSMg01no423_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:11 2005
(448 letters)
>mm_chr9_29608164_29609011
Length = 848
Score = 783 bits (405), Expect = 0.0
Identities = 420/425 (98%), Gaps = 2/425 (0%)
Strand = Plus / Minus
Query: 25 cagttctttgttatgtcccattgaataggttctttgctcctgcaccaatggcagtatgct 84
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cagttctttgttatgttccattgaataggttctttgctcctgcaccaatggcagtatgct 477
Query: 85 ggatttcatttaggttgcagaataaaagaagggtggtcatccgaagcaggagagtgcaac 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ggatttcatttaggttgcagaataaaagaagggtggtcatccgaagcaggagagtgcaac 417
Query: 145 agcctagtgtcactaacagttccatacctacaaggtggacattgtgcagcatagtaatag 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agcctagtgtcactaacagttccatacctacaaggtggacattgtgcagcatagtaatag 357
Query: 205 ggacattgatggcacacaaatgaccagagcccaagaaatatctgctgagcatatactaca 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ggacattgatggcacacaaatgaccagagcccaagaaatatctgctgagcatatactaca 297
Query: 265 tgttctcagcactgaccaggttactgtacggagaatgcacccagaatatgatccagaatg 324
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 296 tgttctcagcactgaccaggttactgtatggagaatgcacccagaatatgatccagaatg 237
Query: 325 tattaagcatgttgtaatggctgatcttcatcataaacttgactggatttggaatcacca 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tattaagcatgttgtaatggctgatcttcatcataaacttgactggatttggaatcacca 177
Query: 385 aggtgacacatatctgagcaagtatttgaggtatttctca-agtttaattgaggaaggaa 443
||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 176 aggcgacacatatctgagcaagtatttgaggtatttct-agagtttaattgaggaaggaa 118
Query: 444 gatac 448
|||||
Sbjct: 117 gatac 113
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_h23.g1 MSMg01no423_h23.g1 CHROMAT_FILE:
MSMg01no423_h23.g1 PHD_FILE: MSMg01no423_h23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:12 2005
(471 letters)
>mm_chr9_29432431_29433301
Length = 871
Score = 888 bits (459), Expect = 0.0
Identities = 468/471 (99%)
Strand = Plus / Plus
Query: 1 accaaaaccgaaatcaactaaatgaccctctatagtacctttaaaaaaatgcccagtaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accaaaaccgaaatcaactaaatgaccctctatagtacctttaaaaaaatgcccagtaat 260
Query: 61 taatataagaaaggtaaagatcttcacaagaaaacaattaaaactctttctaggaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatataagaaaggtaaagatcttcacaagaaaacaattaaaactctttctaggaagaag 320
Query: 121 atcctagaaagtggaaaaactccttacacgcatagatcaggagagccaatactacggaga 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 atcctagaaagtggaaaaactccttacatgcatagatcaggagagccaatactacggaga 380
Query: 181 ctgtgagtatgtacacaattcctgacgtttacaccgcagacccacagtaaccaaaaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtgagtatgtacacaattcctgacgtttacaccgcagacccacagtaaccaaaaaaca 440
Query: 241 tagcattatttcaaaaacagaaaaataagttaaaagaggataatagtaggctcaaaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagcattatttcaaaaacagaaaaataagttaaaagaggataatagtaggctcaaaataa 500
Query: 301 actcacaaaattaccgtcacctatctttttgcaaagacacaaaaaccatgctagagggaa 360
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 actcacaaaattactgtcacctatctttttgcaaagacataaaaaccatgctagagggaa 560
Query: 361 gacagcctcctccaaaagcagcactgagaaaacgagatatctacatgtagaagaaagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacagcctcctccaaaagcagcactgagaaaacgagatatctacatgtagaagaaagaag 620
Query: 421 attcatatctctcaccccatacaagagtaatctcatcacaaacggatcaat 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attcatatctctcaccccatacaagagtaatctcatcacaaacggatcaat 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
