Query= MSMg01no424_c04.b1 MSMg01no424_c04.b1 CHROMAT_FILE:
MSMg01no424_c04.b1 PHD_FILE: MSMg01no424_c04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:00 2005
(628 letters)
>mm_chr9_69458558_69459585
Length = 1028
Score = 1160 bits (600), Expect = 0.0
Identities = 621/628 (98%)
Strand = Plus / Minus
Query: 1 taccacaagcaaaactgtaaggcaggactccatcaagccctgaatagaaagttaaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 687 taccacaagcaaaactgtaaggcaggactccatcaagccctgaatggaaagttaaagaaa 628
Query: 61 attatcattatcatttattctttcagagacctcatttaaacatagtccaggaaaggaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 attatcattatcatttattctttcagagacctcatttaaacatagtccaggaaaggaaaa 568
Query: 121 gaaaggatacattattgcacgtgctcaatttgccatgaatcaagtggaaaaaacaatttc 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 567 gaaaggatacattattgcacgtgctcaatttgccatgaatcaagtgaaaaaaacaatttc 508
Query: 181 aagttctcaggcagaagagatttcaacgtgagtttccttttaaacagaccacgacattca 240
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 507 aagttctcaggcagaagagatttcaaggtgagtttccttttaaacagaccgcgacattca 448
Query: 241 cgttctttcataagctgggcctcaccttagtattgctaactgacccccagtcttcacaca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 447 cgttctttcataagctgggcctcaccttagtattgctaactgacccccagtcttcacata 388
Query: 301 ggagggttagcaaagaggaatgagtttctaaacagtcacacctctctccccatgaggaaa 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggaaggttagcaaagaggaatgagtttctaaacagtcacacctctctccccatgaggaaa 328
Query: 361 ttttattctattttatatttgtgtgtgggtgggaatgggtagagacaagagatagctcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttttattctattttatatttgtgtgtgggtgggaatgggtagagacaagagatagctcat 268
Query: 421 cacccgactaaaatcccaccctcagagctcagtcatcactctgaaagactttaaagaacc 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cacctgactaaaatcccaccctcagagctcagtcatcactctgaaagactttaaagaacc 208
Query: 481 gaatggttttcttccttctttcagcctcccttccctcctgccctccccctcttccttcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaatggttttcttccttctttcagcctcccttccctcctgccctccccctcttccttcct 148
Query: 541 tttctttttaaaattctttcaatttttgaatttttgagacagggtcttgttatgcagttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tttctttttaaaattctttcaatttttgaatttttgagacagggtcttgttatgcagttc 88
Query: 601 aagctggccttcaacttccttcatggtc 628
||||||||||||||||||||||||||||
Sbjct: 87 aagctggccttcaacttccttcatggtc 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_c04.g1 MSMg01no424_c04.g1 CHROMAT_FILE:
MSMg01no424_c04.g1 PHD_FILE: MSMg01no424_c04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:00 2005
(213 letters)
>mm_chr9_69302655_69303268
Length = 614
Score = 406 bits (210), Expect = e-118
Identities = 213/214 (99%), Gaps = 1/214 (0%)
Strand = Plus / Plus
Query: 1 aagatcctcagcctgaaacactcaggagtataattaggtgggtctgcaacttggactcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagatcctcagcctgaaacactcaggagtataattaggtgggtctgcaacttggactcgg 260
Query: 61 gaagccacttccctgcccaaccccaacaaagctatagaatgtgtttggaatcccaagcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagccacttccctgcccaaccccaacaaagctatagaatgtgtttggaatcccaagcta 320
Query: 121 gcaccagaaaaagattaatttgcagtgtatccgagttctggctaaaggcaggg-agcaga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gcaccagaaaaagattaatttgcagtgtatccgagttctggctaaaggcaggggagcaga 380
Query: 180 atgcaaactggggagggtgaggggtgatctgtgg 213
||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcaaactggggagggtgaggggtgatctgtgg 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 614
Length adjustment: 9
Effective length of query: 204
Effective length of database: 605
Effective search space: 123420
Effective search space used: 123420
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
