Query= MSMg01no424_p06.b1 MSMg01no424_p06.b1 CHROMAT_FILE:
MSMg01no424_p06.b1 PHD_FILE: MSMg01no424_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:02 2005
(675 letters)
>mm_chr9_104911725_104912799
Length = 1075
Score = 1183 bits (612), Expect = 0.0
Identities = 649/666 (97%), Gaps = 9/666 (1%)
Strand = Plus / Minus
Query: 4 ggaattcaatattgcctgtcttcttctctgcaggttcatggttcttata--------ata 55
|||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 852 ggaattcaatattggatgtcttcttctctgcaggttcatggttcttataatatatatata 793
Query: 56 tatatatgtatatattgtatatatgtatatatacaatacatatgtattgtattcagttct 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 tatatatgtatatattgtatatatgtatatatacaatacatatgtattgtattcagttct 733
Query: 116 tttatctatttatttaacttctattttacatgggggccttactatgttgcttaagttggg 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tttatctatttatttaacttctattttacatgggggccttactatgttgcttaagttggg 673
Query: 176 gttgagcacagtacatatcactgccctgggcaaggtaccttctattatatgcatcttaag 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gttgagcacagtacatatcactgccctgggcaaggtaccttctattatatgcatcttaag 613
Query: 236 gtccaaacattggggatcctgctaacacttcctcttgttttatctccaaacatgtacact 295
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 612 gtccaaacattggggatcctgctaacacttcctccagtcttatctccaaacatgtacact 553
Query: 296 atattacactacatcattaacatgattatgcacaagtaaaggaaaagagaggattcccac 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 atattacactacatcattaacatgattatgcacaagtaaaggaaaagagaggattcccac 493
Query: 356 tcccgagtcttgaagaagtctctgacacactgtagatgtaatttatcaaactctttcctc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tcccgagtcttgaagaagtctctgacacactgtagatgtaatttatcaaactctttcctc 433
Query: 416 cctagtaaaaaccccatctgcttcaaaccttactagaaattgtccctgaattagagcctg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cctagtaaaaaccccatctgcttcaaaccttactagaaattgtccctgaattagagcctg 373
Query: 476 aagaagtcagagctgaaactcattattgtcacagtcaatacctcaaggtcaagtattccg 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 372 aagaagtcagagctgaaactcattattgtcacagtcaatacctcaaggtcaagtattctg 313
Query: 536 agtgtcactttgtattagtcagggttctctagaggaacagagcctatataatgaatatct 595
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 312 ggtgtcactttgtattagtcagggttctctagaggagcagagcctatataatgaatatct 253
Query: 596 atctatctatctatctatctatctatctatctatctatctatctatctatctatctatct 655
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atctatc-atctatctatctatctatctatctatctatctatctatctatctatctatct 194
Query: 656 atctat 661
||||||
Sbjct: 193 atctat 188
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 84
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_p06.g1 MSMg01no424_p06.g1 CHROMAT_FILE:
MSMg01no424_p06.g1 PHD_FILE: MSMg01no424_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:02 2005
(332 letters)
>mm_chr9_104770318_104771049
Length = 732
Score = 642 bits (332), Expect = 0.0
Identities = 332/332 (100%)
Strand = Plus / Plus
Query: 1 agtctgagggagtatctagtttggagcctgccctgaggatatggtgaaatcctttggtcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtctgagggagtatctagtttggagcctgccctgaggatatggtgaaatcctttggtcg 260
Query: 61 atgatgtcattatttaccagggcctgttagaaacaagggtttctaaccccagtgcactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgatgtcattatttaccagggcctgttagaaacaagggtttctaaccccagtgcactct 320
Query: 121 gactggcctcagtggttggttcctatggccaccaccttcacattctcaccaacagaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gactggcctcagtggttggttcctatggccaccaccttcacattctcaccaacagaaatt 380
Query: 181 ttaaatttacacttacttattttttgttcatttatttaagagcacacttgtcacagtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaatttacacttacttattttttgttcatttatttaagagcacacttgtcacagtctg 440
Query: 241 tgtgctgaggccaaaggataaccagcaagagtcggttctctccttttaccatgtcggatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgctgaggccaaaggataaccagcaagagtcggttctctccttttaccatgtcggatc 500
Query: 301 tagggttagaattcaagtcctggggcttgaga 332
||||||||||||||||||||||||||||||||
Sbjct: 501 tagggttagaattcaagtcctggggcttgaga 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
