Query= MSMg01no425_b18.b1 MSMg01no425_b18.b1 CHROMAT_FILE:
MSMg01no425_b18.b1 PHD_FILE: MSMg01no425_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:14 2005
(618 letters)
>mm_chr9_57451076_57452093
Length = 1018
Score = 1154 bits (597), Expect = 0.0
Identities = 609/615 (99%), Gaps = 4/615 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaagaccatcttcagcaacatgggacctgatatctctgttttatgttacaaata 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ggaattcaagaccatcttcagcaacatgggacctgatatctctgttttatgttacaaata 267
Query: 64 agagagagagagagagagactcagaaaactaagcaatttgcctaagatcataaagccagg 123
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 agagagagagagaga----ctcagaaaactaagcaatttgcctaagatcataaagccagg 323
Query: 124 aagggaagagagggtcgagatttagatctatatcacttcttccaatatctgtacttttgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagggaagagagggtcgagatttagatctatatcacttcttccaatatctgtacttttgt 383
Query: 184 acctacttagagccacccttctcccctgggcatctggggggctgttcggggtcttgtcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acctacttagagccacccttctcccctgggcatctggggggctgttcggggtcttgtcct 443
Query: 244 gtgtcctacacagttgcactcatgtcttcccttctcttctagagtaaagtctcttatgtg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgtcctacacagttgcactcatgtcttcccttctcttctagagtaaagtctcttatgtg 503
Query: 304 atttgtataagcatttgagccatgaccctattgctatctgaacttgcagtaatgcagact 363
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atttatataagcatttgagccatgaccctattgctatctgaacttgcagtaatgcagact 563
Query: 364 ttcctttgagagacttccaaaagactcatgggaagtccgtgacagccaggggctcagtaa 423
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 564 ttcctttgagagacttccaaaagactcatgggaagtctgtgacagccaggggctcagtaa 623
Query: 424 gcacttggttggaggagtaaacctgattccacatagctgatctctgtattgaagtaggaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcacttggttggaggagtaaacctgattccacatagctgatctctgtattgaagtaggaa 683
Query: 484 gccaaggcctggcctatggcaccctactcctcagagtagcccagctctgggcacacaaag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gccaaggcctggcctatggcaccctactcctcagagtagcccagctctgggcacacaaag 743
Query: 544 gttactctggtaagtggcttgtcccatgtaggtgtagcatgcttgtgtgtcagtctagtg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gttactctggtaagtggcttgtcccatgtaggtgtagcatgcttgtgtgtcagtctagtg 803
Query: 604 ctgcagcatcttggg 618
|||||||||||||||
Sbjct: 804 ctgcagcatcttggg 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_b18.g1 MSMg01no425_b18.g1 CHROMAT_FILE:
MSMg01no425_b18.g1 PHD_FILE: MSMg01no425_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:14 2005
(546 letters)
>mm_chr9_57499669_57500614
Length = 946
Score = 648 bits (335), Expect = 0.0
Identities = 350/355 (98%), Gaps = 2/355 (0%)
Strand = Plus / Minus
Query: 193 cacatggcagagggagagaaccaactctcaaagttattcactcaaatgcctctcctctca 252
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 cacatagcagagggagagaaccaactctcaaagttattcactcaaatgcctctcctctca 884
Query: 253 cctctaaaactaaatgaataaatgtaattttttgtttttaaggcttggcgttggcctagg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 cctctaaaactaaatgaataaatgtaattttttgtttttaaggcttggcgttggcctagg 824
Query: 313 gatgtggctcagaagcagagcacatgactagcatgcaaaagagcctgggttccatcccct 372
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 gatgtggctcagaagcggagcacatgactagcatgcaaaagagcctgggttccatcccct 764
Query: 373 attttgcagaaactt-caattgaaaggtcacagagccaggcaggggaaaagtcagcaggg 431
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 attttgcagaaacttac-attgaaaggtcacagagccaggcaggggaaaagtcagcaggg 705
Query: 432 taagtgggaagctgttaaaacagaactacaagcacgtcatcctccgaccttcctctctgc 491
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 taagtaggaagctgttaaaacagaactacaagcacgtcatcctccgaccttcctctctgc 645
Query: 492 cagagacctgatgaccctctgagttcatactctcttcagtttccttttctgcaaa 546
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cagagacctgatgaccctctgagttcatactctcttcagtttccttttctgcaaa 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
