Query= MSMg01no428_h22.b1 MSMg01no428_h22.b1 CHROMAT_FILE:
MSMg01no428_h22.b1 PHD_FILE: MSMg01no428_h22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:41 2005
(294 letters)
>mm_chr9_34512288_34512981
Length = 694
Score = 569 bits (294), Expect = e-167
Identities = 294/294 (100%)
Strand = Plus / Minus
Query: 1 tgaaaagcggaatcttgtcaaaatcatttccaagtgcacctgcagataagagccaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tgaaaagcggaatcttgtcaaaatcatttccaagtgcacctgcagataagagccaagctc 435
Query: 61 tcaccaaaatgccagagagtgaagctctctgctccctcccaccaacccaggctggctccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tcaccaaaatgccagagagtgaagctctctgctccctcccaccaacccaggctggctccc 375
Query: 121 agcagcagactctgcagaggttgcaaagaaatgacccatgtcaaaacttcaacactagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agcagcagactctgcagaggttgcaaagaaatgacccatgtcaaaacttcaacactagcc 315
Query: 181 acactgtcaaggggacaggtggggcatctagacaagactagcaaccccacaggacacggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 acactgtcaaggggacaggtggggcatctagacaagactagcaaccccacaggacacggc 255
Query: 241 ctgcttctgatcttcctggtcgcagatatttgggatggctgccactctgctggc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctgcttctgatcttcctggtcgcagatatttgggatggctgccactctgctggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_h22.g1 MSMg01no428_h22.g1 CHROMAT_FILE:
MSMg01no428_h22.g1 PHD_FILE: MSMg01no428_h22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:41 2005
(494 letters)
>mm_chr9_34350230_34351124
Length = 895
Score = 878 bits (454), Expect = 0.0
Identities = 482/492 (97%), Gaps = 3/492 (0%)
Strand = Plus / Plus
Query: 5 cagattggttgcccaggtctggaaactcccagtttggtgatatattgtctcaaccaagtc 64
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 cagattggttgcccaggtctggaaactcccagtttggtgataggttgtctcaaccaagtc 264
Query: 65 ttcccttccagtgaacaaaggtggctagatagcttcaaagcctcggtgtacccactcatt 124
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 265 ttcccttccagtgaacaaaggtggctagagagcttcaaagcctcagtgtacccactcatt 324
Query: 125 ttgcagtcattcatgagaaagatttacaatttgagtcctgacatctatgcttgaagttgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgcagtcattcatgagaaagatttacaatttgagtcctgacatctatgcttgaagttgt 384
Query: 185 tatcatcacggggttaaaatacctattctagaaatctacatttgagcttggaaaccttca 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatcatcatggggttaaaatacctattctagaaatctacatttgagcttggaaaccttca 444
Query: 245 gcaattattacggtttgtgactatctgaattttccagcaatcactttcgaaaggggagta 304
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 445 gcaattattacggtttgtgactatctgaattttccagcaatcaccttcgaaaggggagta 504
Query: 305 attaatgacacaggctgtagaaataacttgtggcagtggcagacagaactcagacaatgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attaatgacacaggctgtagaaataacttgtggcagtggcagacagaactcagacaatgg 564
Query: 365 ccatgtattgaggaaggaaaaatggtggctctggttaaacggtagatccctgctgactat 424
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccatgtattgaggaaggacaa-tggtggctctggttaaacggtagatccctgctgactat 623
Query: 425 gggttctgtaataggttggccaaagggaatggtgtctctgtaataggttggtaaaaaa-- 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gggttctgtaataggttggccaaagggaatggtgtctctgtaataggttggtaaaaaaaa 683
Query: 483 gtgtgtgtgtgt 494
||||||||||||
Sbjct: 684 gtgtgtgtgtgt 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 895
Length adjustment: 10
Effective length of query: 484
Effective length of database: 885
Effective search space: 428340
Effective search space used: 428340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
