Query= MSMg01no428_k11.b1 MSMg01no428_k11.b1 CHROMAT_FILE:
MSMg01no428_k11.b1 PHD_FILE: MSMg01no428_k11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:54 2005
(242 letters)
>mm_chr9_116878951_116879590
Length = 640
Score = 416 bits (215), Expect = e-121
Identities = 232/238 (97%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 1 aagctgnctgagtgcctatggaagttcccttagcttctcagattcagctgaaacccaaga 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagctgtctgagtgcctatggaagttcccttagcttctcagattcagctgaaacccaaga 260
Query: 61 cttcagttaatttagtcatctttaaatgcatgctcagagatgagcatgataggtgtactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 cttcagttaatttagtcatctttaaatgcatgctcagagatgagcatgataggtggactc 320
Query: 121 tcttccaagtagagcatactcttatgttttcaaacatgtcacccttccgcttaaatttgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttccaagtagagcatactcttatgttttcaaacatgtcacccttccgcttaaatttga 380
Query: 181 ataatgaatggtctaagccacaaaacttggcttctccccccagtaatctattgaagtg 238
| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 a-aatgaatggtcgaagccacaaaacttggcttc-ccccccagtaatctattgaagtg 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 640
Length adjustment: 9
Effective length of query: 233
Effective length of database: 631
Effective search space: 147023
Effective search space used: 147023
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_k11.g1 MSMg01no428_k11.g1 CHROMAT_FILE:
MSMg01no428_k11.g1 PHD_FILE: MSMg01no428_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:54 2005
(156 letters)
>mm_chr9_117065808_117066363
Length = 556
Score = 302 bits (156), Expect = 8e-87
Identities = 156/156 (100%)
Strand = Plus / Minus
Query: 1 cagaagtgctccatgagtcgagtatcatactgtttgtaggattccagagttgtgacactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cagaagtgctccatgagtcgagtatcatactgtttgtaggattccagagttgtgacactg 297
Query: 61 accgtatttatggccacgggtacacccagaaaacactatgtgactgtagtcaccttcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 accgtatttatggccacgggtacacccagaaaacactatgtgactgtagtcaccttcctt 237
Query: 121 tcataaatggcacccaagttaggttgccaaggagac 156
||||||||||||||||||||||||||||||||||||
Sbjct: 236 tcataaatggcacccaagttaggttgccaaggagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 556
Length adjustment: 8
Effective length of query: 148
Effective length of database: 548
Effective search space: 81104
Effective search space used: 81104
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
